Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm5060-201ENSMUST00000120072 599 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm23206-201ENSMUST00000122720 184 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm22597-201ENSMUST00000157602 80 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm22724-201ENSMUST00000158091 127 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm3030-201ENSMUST00000163410 516 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm16490-201ENSMUST00000165299 351 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Mir3095-201ENSMUST00000175552 87 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm37111-201ENSMUST00000193250 634 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm43215-201ENSMUST00000199108 252 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm42927-201ENSMUST00000200624 3841 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trim55G3X8Y1 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 AC102575.1-201ENSMUST00000225348 547 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 AC154600.1-201ENSMUST00000226480 714 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 AC163295.1-201ENSMUST00000227840 314 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 mt-Td-201ENSMUST00000082404 70 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm22229-201ENSMUST00000082987 108 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim55G3X8Y1 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Trim55G3X8Y1 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm12509-201ENSMUST00000118033 609 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm5073-201ENSMUST00000118222 820 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm14172-201ENSMUST00000118255 644 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm26348-201ENSMUST00000157528 240 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm23473-201ENSMUST00000158883 116 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Mir3572-201ENSMUST00000175549 86 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm24957-201ENSMUST00000179604 132 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm43407-201ENSMUST00000199816 317 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm44048-201ENSMUST00000204531 361 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm7039-201ENSMUST00000205138 346 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm46138-201ENSMUST00000215294 426 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm18409-202ENSMUST00000220105 529 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 AC131029.2-202ENSMUST00000228430 496 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Gm38269-201ENSMUST00000194549 3298 ntBASIC5.12□□□□□ -1.59
Trim55G3X8Y1 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim55G3X8Y1 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm23744-201ENSMUST00000104231 149 ntBASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm10552-201ENSMUST00000113396 372 ntBASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm11673-201ENSMUST00000117846 331 ntBASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm13491-201ENSMUST00000118267 235 ntBASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm12053-201ENSMUST00000119022 252 ntBASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm13239-201ENSMUST00000119920 637 ntBASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm15331-201ENSMUST00000120225 385 ntBASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm6373-201ENSMUST00000121026 360 ntBASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm23463-201ENSMUST00000122468 99 ntBASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm25294-201ENSMUST00000122791 104 ntBASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm16254-201ENSMUST00000131528 730 ntBASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.11□□□□□ -1.59
Trim55G3X8Y1 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Trim55G3X8Y1 Gm25058-201ENSMUST00000157365 128 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms