Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Mir147-201ENSMUST00000102354 79 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm12598-201ENSMUST00000117333 830 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm12103-201ENSMUST00000121892 362 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm14907-201ENSMUST00000121948 854 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm12317-201ENSMUST00000122307 319 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm23824-201ENSMUST00000158741 276 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm23799-201ENSMUST00000175559 120 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm13249-201ENSMUST00000177803 345 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm2092-201ENSMUST00000178887 639 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm8807-201ENSMUST00000179328 492 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm13144-201ENSMUST00000179385 345 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm2759-201ENSMUST00000179938 639 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm18667-201ENSMUST00000186523 484 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm18117-201ENSMUST00000187720 742 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm37878-201ENSMUST00000192108 387 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm35702-201ENSMUST00000198653 511 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 AC165146.1-201ENSMUST00000223777 900 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Pcdh9F8VPK8 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Mir467h-201ENSMUST00000116759 121 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm13603-201ENSMUST00000119404 83 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm15480-201ENSMUST00000120442 519 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm7346-201ENSMUST00000169661 476 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm15143-201ENSMUST00000178180 714 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm37979-201ENSMUST00000193065 712 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm8823-201ENSMUST00000193158 433 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm38080-201ENSMUST00000194035 268 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm37836-201ENSMUST00000195875 175 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm17887-201ENSMUST00000200194 547 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm18691-201ENSMUST00000203593 872 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm18645-201ENSMUST00000209593 651 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm45912-201ENSMUST00000210646 543 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm7119-201ENSMUST00000221345 695 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.26□□□□□ -1.73
Pcdh9F8VPK8 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms