Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm13064-201ENSMUST00000119125 557 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm14065-201ENSMUST00000120848 585 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm12858-201ENSMUST00000121913 208 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm25270-201ENSMUST00000122606 138 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm4222-201ENSMUST00000165784 470 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm9587-201ENSMUST00000172449 454 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm7870-201ENSMUST00000184467 616 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm18445-201ENSMUST00000195502 774 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm43214-201ENSMUST00000199242 352 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm17820-201ENSMUST00000220213 1068 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm38699-201ENSMUST00000221301 1740 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 BC055308-201ENSMUST00000193380 2538 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Gm37298-201ENSMUST00000193770 3868 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC2.72□□□□□ -1.97
Col6a4A2AX52 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC2.72□□□□□ -1.97
Col6a4A2AX52 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Col6a4A2AX52 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col6a4A2AX52 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Col6a4A2AX52 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm8430-201ENSMUST00000119780 471 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm12578-201ENSMUST00000121244 417 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm5123-201ENSMUST00000121905 837 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm24380-201ENSMUST00000122696 324 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
Col6a4A2AX52 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm5755-201ENSMUST00000152394 837 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm24958-201ENSMUST00000158009 97 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm38069-201ENSMUST00000195360 2144 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm42578-201ENSMUST00000199960 194 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm36371-201ENSMUST00000209043 1103 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
Col6a4A2AX52 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.71□□□□□ -1.97
Col6a4A2AX52 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col6a4A2AX52 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col6a4A2AX52 Gm11923-201ENSMUST00000118135 508 ntBASIC2.71□□□□□ -1.98
Col6a4A2AX52 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.71□□□□□ -1.98
Col6a4A2AX52 Gm23791-201ENSMUST00000122553 293 ntBASIC2.71□□□□□ -1.98
Col6a4A2AX52 Gm24780-201ENSMUST00000157635 143 ntBASIC2.71□□□□□ -1.98
Col6a4A2AX52 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Col6a4A2AX52 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.71□□□□□ -1.98
Col6a4A2AX52 Gm26297-201ENSMUST00000179464 132 ntBASIC2.71□□□□□ -1.98
Col6a4A2AX52 Gm44972-201ENSMUST00000206419 406 ntBASIC2.71□□□□□ -1.98
Col6a4A2AX52 Gm6850-201ENSMUST00000210031 530 ntBASIC2.71□□□□□ -1.98
Col6a4A2AX52 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.71□□□□□ -1.98
Col6a4A2AX52 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Col6a4A2AX52 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Col6a4A2AX52 Gm336-201ENSMUST00000186376 1480 ntBASIC2.71□□□□□ -1.98
Col6a4A2AX52 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Col6a4A2AX52 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm13581-201ENSMUST00000120675 278 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm26041-201ENSMUST00000158148 108 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm8747-201ENSMUST00000195392 751 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm44688-201ENSMUST00000209083 537 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm22852-201ENSMUST00000177899 101 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
Col6a4A2AX52 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col6a4A2AX52 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm42593-201ENSMUST00000198469 377 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm44869-201ENSMUST00000208836 357 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm35405-201ENSMUST00000218754 400 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 AC157572.3-201ENSMUST00000227288 303 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col6a4A2AX52 Gm4945-201ENSMUST00000075152 453 ntBASIC2.7□□□□□ -1.98
Col6a4A2AX52 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a4A2AX52 Gm14586-201ENSMUST00000119571 408 ntBASIC2.69□□□□□ -1.98
Col6a4A2AX52 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC2.69□□□□□ -1.98
Col6a4A2AX52 Gm24358-201ENSMUST00000158424 288 ntBASIC2.69□□□□□ -1.98
Col6a4A2AX52 Gm17421-201ENSMUST00000167845 674 ntBASIC2.69□□□□□ -1.98
Col6a4A2AX52 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col6a4A2AX52 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col6a4A2AX52 Gm6140-201ENSMUST00000192494 966 ntBASIC2.69□□□□□ -1.98
Col6a4A2AX52 Gm43355-201ENSMUST00000196541 346 ntBASIC2.69□□□□□ -1.98
Col6a4A2AX52 Gm18867-201ENSMUST00000198022 1179 ntBASIC2.69□□□□□ -1.98
Col6a4A2AX52 Gm43368-201ENSMUST00000200638 409 ntBASIC2.69□□□□□ -1.98
Col6a4A2AX52 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC2.69□□□□□ -1.98
Col6a4A2AX52 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Col6a4A2AX52 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms