Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm15313-201ENSMUST00000119179 282 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm11260-201ENSMUST00000121163 942 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm22986-201ENSMUST00000122753 130 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm23591-201ENSMUST00000157663 286 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm17075-201ENSMUST00000171924 670 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm23152-201ENSMUST00000175322 116 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm22108-201ENSMUST00000177961 106 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm24798-201ENSMUST00000179334 106 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm8296-201ENSMUST00000185597 524 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm8035-201ENSMUST00000204625 687 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm10042-201ENSMUST00000079884 78 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Trim3Q9R1R2 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Trim3Q9R1R2 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
Trim3Q9R1R2 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.65□□□□□ -1.82
Trim3Q9R1R2 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Trim3Q9R1R2 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.65□□□□□ -1.82
Trim3Q9R1R2 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Trim3Q9R1R2 Gm24715-201ENSMUST00000102377 95 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm22543-201ENSMUST00000104347 94 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm12106-201ENSMUST00000116006 1200 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm11406-201ENSMUST00000117418 484 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm5757-201ENSMUST00000117494 528 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm13064-201ENSMUST00000119125 557 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm13155-201ENSMUST00000119277 646 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm14282-201ENSMUST00000119484 240 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm14656-201ENSMUST00000120342 502 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm8178-201ENSMUST00000121570 646 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm14383-201ENSMUST00000121637 386 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm7855-201ENSMUST00000137737 687 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm23205-201ENSMUST00000158671 103 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm22693-201ENSMUST00000175049 442 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm22392-201ENSMUST00000177971 107 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm27580-201ENSMUST00000183666 149 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Mir6975-201ENSMUST00000184879 61 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm28574-201ENSMUST00000185757 699 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm28781-201ENSMUST00000185760 696 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm28339-201ENSMUST00000185845 696 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm29062-201ENSMUST00000186032 694 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm29574-201ENSMUST00000186226 696 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm28828-201ENSMUST00000186601 696 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm28057-201ENSMUST00000186603 615 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm28255-201ENSMUST00000187101 694 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm29307-201ENSMUST00000187367 696 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm28397-201ENSMUST00000187970 699 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm8498-201ENSMUST00000188227 974 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm28896-201ENSMUST00000188609 696 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm29545-201ENSMUST00000188878 694 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm29339-201ENSMUST00000189613 696 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm28159-201ENSMUST00000190296 696 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm29366-201ENSMUST00000190481 699 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm29407-201ENSMUST00000191468 696 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm37098-201ENSMUST00000192290 244 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm37433-201ENSMUST00000192695 678 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm37441-201ENSMUST00000194430 678 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm38107-201ENSMUST00000194873 696 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm43441-201ENSMUST00000201458 205 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm9373-201ENSMUST00000208724 599 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm18704-201ENSMUST00000219736 446 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Gm6841-201ENSMUST00000220602 598 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trim3Q9R1R2 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms