Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm13006-201ENSMUST00000118683 214 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm16114-201ENSMUST00000161930 300 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm19206-201ENSMUST00000186401 827 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm37322-201ENSMUST00000193409 337 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm37167-201ENSMUST00000194946 396 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm43215-201ENSMUST00000199108 252 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm44239-201ENSMUST00000204228 271 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm23650-201ENSMUST00000083355 70 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm24695-201ENSMUST00000083877 83 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nubp1Q9R060 AC126549.1-201ENSMUST00000225044 3687 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.71□□□□□ -1.5
Nubp1Q9R060 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nubp1Q9R060 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Mir541-201ENSMUST00000102097 90 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm14237-201ENSMUST00000122080 430 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm5958-201ENSMUST00000147698 297 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm23740-201ENSMUST00000157385 100 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm22596-201ENSMUST00000157601 316 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm10075-201ENSMUST00000162030 545 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm45196-201ENSMUST00000206751 825 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.7□□□□□ -1.5
Nubp1Q9R060 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm4510-201ENSMUST00000218265 427 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm7042-201ENSMUST00000223027 384 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nubp1Q9R060 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.7□□□□□ -1.5
Nubp1Q9R060 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
Nubp1Q9R060 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nubp1Q9R060 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm15151-201ENSMUST00000117106 177 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm11785-201ENSMUST00000120165 601 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Mir199b-201ENSMUST00000175066 110 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm22917-201ENSMUST00000180116 110 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm29330-201ENSMUST00000190032 699 ntBASIC5.69□□□□□ -1.5
Nubp1Q9R060 Gm37375-201ENSMUST00000193859 387 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms