Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm43239-201ENSMUST00000200131 201 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm6719-201ENSMUST00000202067 335 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm44946-201ENSMUST00000208425 572 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm45273-201ENSMUST00000211559 281 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm2607-201ENSMUST00000212389 627 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm17917-201ENSMUST00000218561 953 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm17829-201ENSMUST00000219782 344 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 AC131745.2-201ENSMUST00000225736 565 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm11577-201ENSMUST00000118030 737 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm14908-201ENSMUST00000120930 1286 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm11281-201ENSMUST00000141391 576 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm7335-201ENSMUST00000172475 373 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm18382-201ENSMUST00000194394 582 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm37817-201ENSMUST00000195276 434 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm43115-201ENSMUST00000196244 160 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm43309-201ENSMUST00000200837 458 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm44076-201ENSMUST00000203072 520 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm43945-201ENSMUST00000203595 754 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm44727-201ENSMUST00000204225 451 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm18672-201ENSMUST00000208035 270 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Supt4b-201ENSMUST00000214434 351 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm18903-201ENSMUST00000215343 480 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm29785-201ENSMUST00000217033 383 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm23928-201ENSMUST00000082469 145 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trem1Q9JKE2 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.44□□□□□ -1.86
Trem1Q9JKE2 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm23226-201ENSMUST00000116927 103 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm13451-201ENSMUST00000117649 592 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm13501-201ENSMUST00000118477 979 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm13745-201ENSMUST00000121994 527 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm15147-201ENSMUST00000122263 483 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm22516-201ENSMUST00000158266 124 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm17117-201ENSMUST00000163665 299 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm2053-201ENSMUST00000195671 631 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm44348-201ENSMUST00000200165 122 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Gm46998-201ENSMUST00000221444 330 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trem1Q9JKE2 Mir17-201ENSMUST00000083574 84 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms