Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
Smco4Q9JIS3 Gm38104-201ENSMUST00000195121 1895 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm26423-201ENSMUST00000104277 128 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm14299-201ENSMUST00000117586 397 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm16128-201ENSMUST00000117855 626 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm12722-201ENSMUST00000118507 493 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm13064-201ENSMUST00000119125 557 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm17086-201ENSMUST00000171346 484 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Mir5134-201ENSMUST00000175529 78 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm26585-201ENSMUST00000180890 630 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm28785-201ENSMUST00000187478 379 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm7182-201ENSMUST00000193351 732 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm43227-201ENSMUST00000202239 677 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm44099-201ENSMUST00000203299 112 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm43945-201ENSMUST00000203595 754 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm5322-201ENSMUST00000206142 699 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm21007-201ENSMUST00000221024 326 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm23847-201ENSMUST00000083829 110 ntBASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Smco4Q9JIS3 Gm37114-201ENSMUST00000195065 1804 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm24281-201ENSMUST00000104234 136 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm14982-201ENSMUST00000121102 442 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm11350-201ENSMUST00000121436 870 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm13210-201ENSMUST00000121483 273 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm15065-201ENSMUST00000121699 273 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm11414-201ENSMUST00000121795 263 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm5963-201ENSMUST00000143451 236 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm25906-201ENSMUST00000158489 126 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm2950-201ENSMUST00000185530 520 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm28195-201ENSMUST00000186992 372 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm18800-202ENSMUST00000188688 1105 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm43239-201ENSMUST00000200131 201 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm18462-201ENSMUST00000208112 417 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm45588-201ENSMUST00000211213 630 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 AC115750.1-201ENSMUST00000220441 567 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 AC096628.1-201ENSMUST00000226060 641 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm9765-201ENSMUST00000043170 321 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 AC122840.2-201ENSMUST00000221030 2659 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Smco4Q9JIS3 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.48□□□□□ -2.01
Smco4Q9JIS3 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.48□□□□□ -2.01
Smco4Q9JIS3 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Smco4Q9JIS3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.48□□□□□ -2.01
Smco4Q9JIS3 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Smco4Q9JIS3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Smco4Q9JIS3 Gm11372-201ENSMUST00000117348 570 ntBASIC2.48□□□□□ -2.01
Smco4Q9JIS3 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.48□□□□□ -2.01
Smco4Q9JIS3 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Smco4Q9JIS3 Gm6265-201ENSMUST00000149263 231 ntBASIC2.48□□□□□ -2.01
Smco4Q9JIS3 Gm5967-201ENSMUST00000172723 494 ntBASIC2.48□□□□□ -2.01
Smco4Q9JIS3 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms