Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Mir5098-201ENSMUST00000175320 82 ntBASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm18899-201ENSMUST00000217663 546 ntBASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.45□□□□□ -1.86
Lima1Q9ERG0 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Gm14927-201ENSMUST00000120283 454 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Gm23112-201ENSMUST00000158606 125 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Gm19898-201ENSMUST00000177490 251 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Gm37343-201ENSMUST00000192542 111 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Lima1Q9ERG0 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm14621-201ENSMUST00000117709 689 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm12515-201ENSMUST00000120116 361 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm11965-201ENSMUST00000122017 277 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm22480-201ENSMUST00000122568 128 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm7846-201ENSMUST00000145844 274 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm27648-201ENSMUST00000184315 107 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm43704-201ENSMUST00000196164 496 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm35876-201ENSMUST00000205044 459 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm44294-201ENSMUST00000205090 728 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm6230-201ENSMUST00000208077 780 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm45814-201ENSMUST00000212646 775 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm7530-201ENSMUST00000218466 605 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm25205-201ENSMUST00000082841 103 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm23460-201ENSMUST00000083258 109 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm23455-201ENSMUST00000083331 100 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Mir346-201ENSMUST00000083547 98 ntBASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Lima1Q9ERG0 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Mir690-201ENSMUST00000102110 109 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm25169-201ENSMUST00000104190 129 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm12125-201ENSMUST00000117261 736 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm14352-201ENSMUST00000119250 449 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm15157-201ENSMUST00000121852 702 ntBASIC3.42□□□□□ -1.86
Lima1Q9ERG0 Gm26276-201ENSMUST00000157099 109 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms