Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm14825-201ENSMUST00000113538 701 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm13650-201ENSMUST00000117729 433 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm6486-201ENSMUST00000166202 434 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm23152-201ENSMUST00000175322 116 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm27952-201ENSMUST00000184748 105 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm5829-201ENSMUST00000191383 351 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm6680-201ENSMUST00000192789 950 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm36954-201ENSMUST00000195362 363 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm44403-201ENSMUST00000198554 129 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm26387-201ENSMUST00000104238 132 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm23609-201ENSMUST00000104542 127 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm11869-201ENSMUST00000118701 329 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm11260-201ENSMUST00000121163 942 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm13508-201ENSMUST00000121639 775 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm13419-201ENSMUST00000121711 271 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm25860-201ENSMUST00000158252 126 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm43440-201ENSMUST00000201957 729 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm18899-201ENSMUST00000217663 546 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 AF357428-201ENSMUST00000083815 69 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.49□□□□□ -1.85
Ccdc3Q9D6Y1 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm24831-201ENSMUST00000116778 126 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm25843-201ENSMUST00000122582 314 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm24059-201ENSMUST00000157493 312 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm15946-201ENSMUST00000160654 423 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Snord92-201ENSMUST00000175548 85 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm37698-201ENSMUST00000192605 463 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm37934-201ENSMUST00000192902 402 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm42926-201ENSMUST00000200496 697 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm44869-201ENSMUST00000208836 357 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm35857-201ENSMUST00000212739 178 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm8106-201ENSMUST00000213123 523 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Ccdc3Q9D6Y1 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms