Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Gm19219-201ENSMUST00000215863 724 ntBASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Gm17917-201ENSMUST00000218561 953 ntBASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Gm7119-201ENSMUST00000221345 695 ntBASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Mir323-201ENSMUST00000083683 86 ntBASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Gm5518-201ENSMUST00000084171 648 ntBASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Ccdc39Q9D5Y1 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm12467-201ENSMUST00000117625 745 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm12873-201ENSMUST00000119988 422 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm11829-201ENSMUST00000121003 282 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Mup-ps15-201ENSMUST00000121741 539 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm22988-201ENSMUST00000122759 144 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm24976-201ENSMUST00000158972 135 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm27427-201ENSMUST00000185134 193 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm19637-201ENSMUST00000185933 579 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm43155-201ENSMUST00000202661 494 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm44475-201ENSMUST00000204041 424 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm44703-201ENSMUST00000205724 248 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 AC154828.2-201ENSMUST00000220908 1070 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Snora7a-201ENSMUST00000082629 140 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ccdc39Q9D5Y1 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Mir1193-201ENSMUST00000116761 121 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm11746-201ENSMUST00000119843 821 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm11704-201ENSMUST00000120031 214 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm13459-201ENSMUST00000121558 646 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm23602-201ENSMUST00000157258 132 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm23540-201ENSMUST00000157543 164 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm6486-201ENSMUST00000166202 434 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm44355-201ENSMUST00000200417 104 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm18861-201ENSMUST00000202509 1186 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm31532-201ENSMUST00000203555 767 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm17989-201ENSMUST00000211543 412 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 AC153801.1-201ENSMUST00000217904 947 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm18116-201ENSMUST00000220920 537 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm23058-201ENSMUST00000093703 107 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ccdc39Q9D5Y1 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm11923-201ENSMUST00000118135 508 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm12458-201ENSMUST00000119387 495 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm7846-201ENSMUST00000145844 274 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm24059-201ENSMUST00000157493 312 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm25667-201ENSMUST00000157701 275 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Gm44343-201ENSMUST00000196702 90 ntBASIC4.34□□□□□ -1.71
Ccdc39Q9D5Y1 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms