Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm37172-201ENSMUST00000191926 615 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm38270-201ENSMUST00000192721 407 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm44376-201ENSMUST00000197570 128 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm20039-201ENSMUST00000210329 394 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm7093-201ENSMUST00000223004 581 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Mir28a-201ENSMUST00000083560 86 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm25537-201ENSMUST00000103851 109 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm12294-201ENSMUST00000119723 490 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm14238-201ENSMUST00000120227 323 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm14649-201ENSMUST00000121814 324 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm22453-201ENSMUST00000122801 318 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm23034-201ENSMUST00000158001 147 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm25553-201ENSMUST00000158076 79 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Mir5134-201ENSMUST00000175529 78 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm19898-201ENSMUST00000177490 251 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Mir6899-201ENSMUST00000184798 64 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm28724-202ENSMUST00000194218 295 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm43856-201ENSMUST00000197004 369 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm5552-201ENSMUST00000197149 515 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm44583-201ENSMUST00000207478 281 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Vps28Q9D1C8 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Vps28Q9D1C8 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm14172-201ENSMUST00000118255 644 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm14517-201ENSMUST00000119040 337 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm14913-201ENSMUST00000120011 1093 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm5379-201ENSMUST00000120973 826 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm25908-201ENSMUST00000157624 98 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm26045-201ENSMUST00000157862 97 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm24898-201ENSMUST00000158133 106 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm23215-201ENSMUST00000178153 121 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm42758-201ENSMUST00000202146 283 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Vps28Q9D1C8 AL929265.1-201ENSMUST00000213427 125 ntBASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.3□□□□□ -1.72
Vps28Q9D1C8 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms