Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Mir3970-201ENSMUST00000199287 90 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm44485-201ENSMUST00000199569 137 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm46223-201ENSMUST00000215196 675 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 AC126554.1-201ENSMUST00000222161 271 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm24764-201ENSMUST00000083686 199 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ssu72Q9CY97 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.1□□□□□ -1.59
Ssu72Q9CY97 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm26078-201ENSMUST00000104067 128 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm6797-201ENSMUST00000119440 512 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm12422-201ENSMUST00000121431 302 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm25806-201ENSMUST00000122782 122 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm25339-201ENSMUST00000157458 232 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm25184-201ENSMUST00000157753 163 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm26372-201ENSMUST00000157831 236 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm24731-201ENSMUST00000158227 131 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm22940-201ENSMUST00000158560 155 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm25714-201ENSMUST00000158626 296 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm27854-201ENSMUST00000175578 244 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm23141-201ENSMUST00000178682 94 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm23302-201ENSMUST00000082710 100 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.09□□□□□ -1.59
Ssu72Q9CY97 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Ssu72Q9CY97 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.09□□□□□ -1.6
Ssu72Q9CY97 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.09□□□□□ -1.6
Ssu72Q9CY97 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Ssu72Q9CY97 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Ssu72Q9CY97 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.08□□□□□ -1.6
Ssu72Q9CY97 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm24350-201ENSMUST00000104163 133 ntBASIC5.08□□□□□ -1.6
Ssu72Q9CY97 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm12787-201ENSMUST00000119234 396 ntBASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm13717-201ENSMUST00000119868 365 ntBASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm22085-201ENSMUST00000158344 110 ntBASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm24499-201ENSMUST00000158446 104 ntBASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm25156-201ENSMUST00000179809 79 ntBASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm6075-201ENSMUST00000186816 486 ntBASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm19193-201ENSMUST00000190263 590 ntBASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm43115-201ENSMUST00000196244 160 ntBASIC5.08□□□□□ -1.6
Ssu72Q9CY97 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms