Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Smc1aQ9CU62 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm26143-201ENSMUST00000104480 108 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm12335-201ENSMUST00000119738 327 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm11344-201ENSMUST00000122011 335 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm14840-201ENSMUST00000122135 594 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm24002-201ENSMUST00000158456 104 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm24734-201ENSMUST00000158860 262 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm5731-201ENSMUST00000190969 481 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm18984-201ENSMUST00000193998 1124 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm36259-201ENSMUST00000197340 392 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 AC153544.1-201ENSMUST00000217988 400 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 AC154419.1-201ENSMUST00000227627 272 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Snora31-201ENSMUST00000083213 130 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm25581-201ENSMUST00000083410 164 ntBASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Smc1aQ9CU62 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.34□□□□□ -1.72
Smc1aQ9CU62 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Smc1aQ9CU62 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.34□□□□□ -1.72
Smc1aQ9CU62 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Smc1aQ9CU62 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Smc1aQ9CU62 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Smc1aQ9CU62 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Gm13155-201ENSMUST00000119277 646 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Gm15014-201ENSMUST00000120742 258 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Gm8178-201ENSMUST00000121570 646 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Gm13419-201ENSMUST00000121711 271 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Gm22059-201ENSMUST00000157544 104 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Gm16290-201ENSMUST00000161175 474 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Gm28997-201ENSMUST00000188759 429 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Gm38098-201ENSMUST00000194115 241 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Gm18377-201ENSMUST00000215141 607 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Smc1aQ9CU62 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm26418-201ENSMUST00000104275 137 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm15377-201ENSMUST00000119594 246 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm26276-201ENSMUST00000157099 109 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm24739-201ENSMUST00000158855 292 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm16147-201ENSMUST00000162143 373 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Ighv8-1-201ENSMUST00000194897 291 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm43649-201ENSMUST00000196596 391 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm42438-201ENSMUST00000197832 974 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm9375-201ENSMUST00000208899 903 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm19232-201ENSMUST00000211621 652 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm23846-201ENSMUST00000083835 107 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.32□□□□□ -1.72
Smc1aQ9CU62 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.32□□□□□ -1.72
Smc1aQ9CU62 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.31□□□□□ -1.72
Smc1aQ9CU62 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms