Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm20574-201ENSMUST00000182867 917 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm27875-201ENSMUST00000184425 123 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm18100-201ENSMUST00000200897 452 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm20039-201ENSMUST00000210329 394 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Use1Q9CQ56 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm8249-201ENSMUST00000219225 465 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm8274-201ENSMUST00000219820 463 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm24626-201ENSMUST00000082621 161 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm25481-201ENSMUST00000083221 158 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm22829-201ENSMUST00000083771 106 ntBASIC3.52□□□□□ -1.85
Use1Q9CQ56 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Use1Q9CQ56 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Use1Q9CQ56 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Use1Q9CQ56 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm25647-201ENSMUST00000101832 78 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm25823-201ENSMUST00000101995 78 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm12587-201ENSMUST00000120180 427 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm14591-201ENSMUST00000120407 518 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Mir1947-201ENSMUST00000158235 85 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm22890-201ENSMUST00000158642 144 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm24220-201ENSMUST00000177753 79 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm25988-201ENSMUST00000177759 79 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm23471-201ENSMUST00000177886 79 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm26488-201ENSMUST00000178225 79 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm23449-201ENSMUST00000179208 79 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm25221-201ENSMUST00000180051 79 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm30280-201ENSMUST00000192214 262 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm38098-201ENSMUST00000194115 241 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm43601-201ENSMUST00000196294 945 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm8423-201ENSMUST00000211387 607 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm17829-201ENSMUST00000219782 344 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm6776-201ENSMUST00000057752 900 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Use1Q9CQ56 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.51□□□□□ -1.85
Use1Q9CQ56 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm24281-201ENSMUST00000104234 136 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm15382-201ENSMUST00000118011 537 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm11896-201ENSMUST00000121105 820 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm14577-201ENSMUST00000121134 256 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm15157-201ENSMUST00000121852 702 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm22208-201ENSMUST00000122658 110 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC3.5□□□□□ -1.85
Use1Q9CQ56 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm23234-201ENSMUST00000157304 134 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm25185-201ENSMUST00000157754 96 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm24503-201ENSMUST00000158454 135 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm23023-201ENSMUST00000158767 109 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Snord92-201ENSMUST00000175548 85 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm25019-201ENSMUST00000179732 110 ntBASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.5□□□□□ -1.85
Use1Q9CQ56 Gm11394-201ENSMUST00000181421 517 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms