Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm11698-201ENSMUST00000117948 455 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm2318-201ENSMUST00000119623 639 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm2768-201ENSMUST00000121062 250 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm6568-201ENSMUST00000122274 697 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm3084-201ENSMUST00000169967 598 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm18396-201ENSMUST00000177095 361 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm7438-201ENSMUST00000177664 639 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm7408-201ENSMUST00000178014 639 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm7386-201ENSMUST00000178020 639 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm3657-201ENSMUST00000178170 639 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm7415-201ENSMUST00000178205 639 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm7398-201ENSMUST00000178589 639 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm7391-201ENSMUST00000178680 639 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm7375-201ENSMUST00000179232 639 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm3681-201ENSMUST00000179940 639 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm27861-201ENSMUST00000183920 214 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm18185-201ENSMUST00000186725 667 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm29668-201ENSMUST00000187802 315 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm37836-201ENSMUST00000195875 175 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm42566-201ENSMUST00000197120 643 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm43015-201ENSMUST00000199087 565 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm43710-201ENSMUST00000199583 452 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm20997-201ENSMUST00000205148 231 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm3189-201ENSMUST00000205595 832 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm8319-201ENSMUST00000205708 641 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Brf1Q8CFK2 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm22272-201ENSMUST00000104039 134 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm11420-201ENSMUST00000120047 402 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm14651-201ENSMUST00000147192 442 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm25966-201ENSMUST00000157169 117 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm24438-201ENSMUST00000157893 115 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm22733-201ENSMUST00000158094 91 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm22917-201ENSMUST00000180116 110 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm28660-201ENSMUST00000186496 253 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm43304-201ENSMUST00000196803 326 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm43856-201ENSMUST00000197004 369 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm45063-201ENSMUST00000203726 472 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm44817-201ENSMUST00000205416 453 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm45530-201ENSMUST00000211658 225 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm5374-201ENSMUST00000222868 657 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 n-R5s79-201ENSMUST00000083071 120 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm23516-201ENSMUST00000093728 107 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Brf1Q8CFK2 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 AC156025.1-201ENSMUST00000223597 3551 ntBASIC5.22□□□□□ -1.57
Brf1Q8CFK2 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms