Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm25833-201ENSMUST00000104137 133 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm14875-201ENSMUST00000120881 319 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm14907-201ENSMUST00000121948 854 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm25295-201ENSMUST00000122794 306 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm22378-201ENSMUST00000157481 111 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm22398-201ENSMUST00000174941 125 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm25731-201ENSMUST00000175167 125 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm18397-201ENSMUST00000176704 587 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Mir7682-201ENSMUST00000198467 58 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm42516-201ENSMUST00000198691 767 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm43424-201ENSMUST00000200484 253 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm8035-201ENSMUST00000204625 687 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 AC159476.2-201ENSMUST00000216221 418 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 AC152979.4-201ENSMUST00000219893 379 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 AC117656.3-204ENSMUST00000225656 859 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Snord14e-201ENSMUST00000082857 90 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nup88Q8CEC0 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm16400-201ENSMUST00000116523 1029 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm11881-201ENSMUST00000119408 572 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm12881-201ENSMUST00000121191 203 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm8244-201ENSMUST00000121254 264 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm22059-201ENSMUST00000157544 104 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm26983-201ENSMUST00000182051 388 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm19427-201ENSMUST00000183619 208 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Mir7047-201ENSMUST00000184595 64 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm29408-201ENSMUST00000187536 216 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm4528-201ENSMUST00000207905 551 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm45409-201ENSMUST00000211486 252 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 CT573422.1-201ENSMUST00000216655 405 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm46234-201ENSMUST00000218702 259 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 AC156574.2-201ENSMUST00000228023 282 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.55□□□□□ -1.68
Nup88Q8CEC0 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm26273-201ENSMUST00000104180 131 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm26418-201ENSMUST00000104275 137 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm2348-201ENSMUST00000108782 300 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm12467-201ENSMUST00000117625 745 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm13059-201ENSMUST00000119881 398 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm22345-201ENSMUST00000122644 107 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm16318-201ENSMUST00000162402 601 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm18522-201ENSMUST00000173947 650 ntBASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Nup88Q8CEC0 Gm24969-201ENSMUST00000180331 79 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms