Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm15951-201ENSMUST00000118377 400 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm13973-201ENSMUST00000121371 894 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm14907-201ENSMUST00000121948 854 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm7855-201ENSMUST00000137737 687 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm23123-201ENSMUST00000157648 144 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm24727-201ENSMUST00000158231 144 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm23257-201ENSMUST00000158322 132 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm23365-201ENSMUST00000175019 125 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm25960-201ENSMUST00000175110 125 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm44453-201ENSMUST00000175161 126 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm25195-201ENSMUST00000177656 126 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm37098-201ENSMUST00000192290 244 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm18547-201ENSMUST00000192439 811 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm37416-201ENSMUST00000193596 318 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm37418-201ENSMUST00000195031 274 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm42526-201ENSMUST00000198956 393 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm44088-201ENSMUST00000204595 237 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm18855-201ENSMUST00000206689 570 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm4052-201ENSMUST00000220890 451 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm25799-201ENSMUST00000082643 107 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lrif1Q8CDD9 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm11843-201ENSMUST00000118984 425 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm14541-201ENSMUST00000118985 157 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm14282-201ENSMUST00000119484 240 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm11708-201ENSMUST00000119530 832 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm11404-201ENSMUST00000120872 494 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm24905-201ENSMUST00000158129 104 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm24773-201ENSMUST00000158513 99 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Mir5127-201ENSMUST00000175295 71 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm22392-201ENSMUST00000177971 107 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm21809-201ENSMUST00000178495 468 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm17412-201ENSMUST00000179261 468 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm26556-201ENSMUST00000180645 320 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm6590-201ENSMUST00000203343 687 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Gm44137-201ENSMUST00000203670 367 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Mir132-201ENSMUST00000083603 66 ntBASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lrif1Q8CDD9 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms