Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm5471-201ENSMUST00000072732 337 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Snord15a-201ENSMUST00000083888 148 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.47□□□□□ -1.69
Atg4aQ8C9S8 AC154681.1-201ENSMUST00000225876 1735 ntBASIC4.46□□□□□ -1.69
Atg4aQ8C9S8 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.46□□□□□ -1.69
Atg4aQ8C9S8 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.46□□□□□ -1.69
Atg4aQ8C9S8 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm36962-201ENSMUST00000192114 1761 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Mir804-201ENSMUST00000103251 95 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm14943-201ENSMUST00000118056 546 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm15026-201ENSMUST00000119219 458 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm15120-201ENSMUST00000120602 301 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm11835-201ENSMUST00000120635 663 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm28925-201ENSMUST00000188586 168 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm37239-201ENSMUST00000193510 141 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm44857-201ENSMUST00000208331 196 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm2059-201ENSMUST00000212025 287 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Gm12582-201ENSMUST00000030555 697 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Atg4aQ8C9S8 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm43369-201ENSMUST00000196373 1552 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm15125-201ENSMUST00000116185 800 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm15001-201ENSMUST00000117657 795 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm13755-201ENSMUST00000118509 305 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm22480-201ENSMUST00000122568 128 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm26276-201ENSMUST00000157099 109 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm25981-201ENSMUST00000157921 295 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm22646-201ENSMUST00000175130 115 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm27392-201ENSMUST00000185041 101 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm37343-201ENSMUST00000192542 111 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm6064-201ENSMUST00000203999 454 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm25205-201ENSMUST00000082841 103 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm23104-201ENSMUST00000083722 104 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm10704-201ENSMUST00000098952 730 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.45□□□□□ -1.7
Atg4aQ8C9S8 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm26377-201ENSMUST00000102184 108 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm13678-201ENSMUST00000118926 340 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm14875-201ENSMUST00000120881 319 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm14463-201ENSMUST00000121117 498 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm15529-201ENSMUST00000121833 994 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm24080-201ENSMUST00000175178 232 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm17781-201ENSMUST00000195232 649 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm44475-201ENSMUST00000204041 424 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm19761-201ENSMUST00000205372 391 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm19709-201ENSMUST00000215403 482 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm34005-201ENSMUST00000215834 282 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm25004-201ENSMUST00000083811 161 ntBASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Atg4aQ8C9S8 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms