Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm25848-201ENSMUST00000116790 144 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm13932-201ENSMUST00000120873 610 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm26393-201ENSMUST00000157625 129 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm23032-201ENSMUST00000157995 107 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Mir6410-201ENSMUST00000184204 104 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm27690-201ENSMUST00000184596 126 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm3454-201ENSMUST00000185571 412 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm37111-201ENSMUST00000193250 634 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm43171-201ENSMUST00000199882 291 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm6051-201ENSMUST00000201529 352 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm45007-201ENSMUST00000206237 366 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm44757-201ENSMUST00000206373 157 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 AC153541.1-201ENSMUST00000213786 294 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 AL935138.1-201ENSMUST00000215309 196 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm3338-201ENSMUST00000220982 269 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 AC156790.3-201ENSMUST00000226200 254 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.72□□□□□ -1.65
Trerf1Q8BXJ2 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Trerf1Q8BXJ2 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.65
Trerf1Q8BXJ2 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm23193-201ENSMUST00000102427 82 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm23014-201ENSMUST00000104144 130 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm23709-201ENSMUST00000104364 130 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm11843-201ENSMUST00000118984 425 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm14586-201ENSMUST00000119571 408 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm13687-201ENSMUST00000119857 282 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm15111-201ENSMUST00000122142 878 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm25278-201ENSMUST00000157267 120 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm22601-201ENSMUST00000157595 250 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm23585-201ENSMUST00000157656 102 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm16114-201ENSMUST00000161930 300 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm22177-201ENSMUST00000175002 158 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm25412-201ENSMUST00000180258 107 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm21856-201ENSMUST00000187547 696 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm29097-201ENSMUST00000190273 422 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm21735-201ENSMUST00000190360 696 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm18181-201ENSMUST00000190670 736 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm29038-201ENSMUST00000191543 678 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm44485-201ENSMUST00000199569 137 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm44779-201ENSMUST00000206937 708 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 AC130823.2-201ENSMUST00000226169 290 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 AC107453.2-201ENSMUST00000227714 655 ntBASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Trerf1Q8BXJ2 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms