Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm16563-201ENSMUST00000162673 423 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm22693-201ENSMUST00000175049 442 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm27695-201ENSMUST00000184301 91 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm42516-201ENSMUST00000198691 767 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm45434-201ENSMUST00000210550 293 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 AC151843.1-201ENSMUST00000215960 691 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm18507-201ENSMUST00000218855 525 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm6841-201ENSMUST00000220602 598 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Ccdc40Q8BI79 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm24096-201ENSMUST00000103905 110 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm15994-201ENSMUST00000118029 402 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm11387-201ENSMUST00000120266 772 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm17204-201ENSMUST00000167936 478 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Mir5134-201ENSMUST00000175529 78 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm25944-201ENSMUST00000178758 94 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm22917-201ENSMUST00000180116 110 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm42451-201ENSMUST00000197410 244 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm34091-201ENSMUST00000200875 604 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Snora70-201ENSMUST00000083047 137 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc40Q8BI79 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Ccdc40Q8BI79 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
Ccdc40Q8BI79 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.09□□□□□ -1.76
Ccdc40Q8BI79 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm11881-201ENSMUST00000119408 572 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm22478-201ENSMUST00000122570 154 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm23167-201ENSMUST00000157155 103 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm24537-201ENSMUST00000157950 102 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm9587-201ENSMUST00000172449 454 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm20542-201ENSMUST00000174582 372 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm23799-201ENSMUST00000175559 120 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm9238-201ENSMUST00000196181 329 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm17780-201ENSMUST00000207142 612 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Gm24611-201ENSMUST00000083272 107 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Olfr203-201ENSMUST00000089305 924 ntBASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc40Q8BI79 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc40Q8BI79 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms