Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mir669a-9-201ENSMUST00000200087 87 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Mir669a-8-201ENSMUST00000200268 87 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 AC109172.1-201ENSMUST00000227503 187 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm6462-201ENSMUST00000081488 304 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm24622-201ENSMUST00000082619 162 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Ubfd1Q78JW9 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm38699-201ENSMUST00000221301 1740 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm23193-201ENSMUST00000102427 82 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm13973-201ENSMUST00000121371 894 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm12045-201ENSMUST00000122122 573 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm16331-201ENSMUST00000144274 498 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm22277-201ENSMUST00000157204 277 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm23902-201ENSMUST00000157571 134 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm22733-201ENSMUST00000158094 91 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm5263-201ENSMUST00000163646 601 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm23568-201ENSMUST00000177960 92 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm24829-201ENSMUST00000179245 92 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm29299-201ENSMUST00000185609 923 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm29196-201ENSMUST00000189239 618 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm29573-201ENSMUST00000190291 919 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm5552-201ENSMUST00000197149 515 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Mir5121-201ENSMUST00000198528 74 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.44□□□□□ -1.7
Ubfd1Q78JW9 Gm42828-201ENSMUST00000199669 469 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms