Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm8569-201ENSMUST00000117630 647 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Mup-ps14-201ENSMUST00000118437 532 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm14541-201ENSMUST00000118985 157 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Mup-ps10-201ENSMUST00000119626 556 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Mup-ps13-201ENSMUST00000120662 545 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Mup-ps1-201ENSMUST00000120720 544 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm11575-201ENSMUST00000122243 228 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm23554-201ENSMUST00000157818 110 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm29105-201ENSMUST00000187256 450 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm29598-201ENSMUST00000188996 588 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm37098-201ENSMUST00000192290 244 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm42451-201ENSMUST00000197410 244 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm43651-201ENSMUST00000199796 439 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm7639-201ENSMUST00000212608 484 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm18585-201ENSMUST00000215197 556 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Krt39Q6IFX4 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Krt39Q6IFX4 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm7869-201ENSMUST00000121457 1322 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 AC154552.6-201ENSMUST00000221365 1342 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm25313-201ENSMUST00000101817 116 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm23319-201ENSMUST00000104467 131 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm13831-201ENSMUST00000118764 302 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm12748-201ENSMUST00000120763 504 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm14875-201ENSMUST00000120881 319 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm6373-201ENSMUST00000121026 360 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm12327-201ENSMUST00000121729 1168 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm25386-201ENSMUST00000157814 288 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm23205-201ENSMUST00000158671 103 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm23287-201ENSMUST00000179427 116 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm23143-201ENSMUST00000180137 116 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm24871-201ENSMUST00000083099 116 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Rnu5g-201ENSMUST00000093721 116 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.31□□□□□ -1.72
Krt39Q6IFX4 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Gm5943-201ENSMUST00000119458 459 ntBASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Gm11718-201ENSMUST00000119942 537 ntBASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Gm11387-201ENSMUST00000120266 772 ntBASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Gm15120-201ENSMUST00000120602 301 ntBASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Gm12383-201ENSMUST00000120628 760 ntBASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Gm11506-201ENSMUST00000122414 470 ntBASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Gm2862-201ENSMUST00000161524 328 ntBASIC4.3□□□□□ -1.72
Krt39Q6IFX4 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms