Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
CtcfQ61164 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CtcfQ61164 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC4.58□□□□□ -1.68
CtcfQ61164 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CtcfQ61164 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Mir465-201ENSMUST00000093563 74 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.58□□□□□ -1.68
CtcfQ61164 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CtcfQ61164 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CtcfQ61164 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm14797-201ENSMUST00000119378 1480 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CtcfQ61164 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm23608-201ENSMUST00000104545 128 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm12393-201ENSMUST00000117084 848 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm8666-201ENSMUST00000117517 292 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm15110-201ENSMUST00000117545 881 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm12225-201ENSMUST00000117995 298 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm15333-201ENSMUST00000118825 364 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Defa-ps1-201ENSMUST00000119062 282 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm12881-201ENSMUST00000121191 203 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Defa-ps6-201ENSMUST00000122172 282 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm4487-201ENSMUST00000150617 442 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm23743-201ENSMUST00000157389 274 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Ear-ps10-201ENSMUST00000161871 460 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm25944-201ENSMUST00000178758 94 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CtcfQ61164 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm21006-201ENSMUST00000196930 667 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm43440-201ENSMUST00000201957 729 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm3189-201ENSMUST00000205595 832 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
CtcfQ61164 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm18026-201ENSMUST00000222789 727 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 AC121114.1-201ENSMUST00000228522 570 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CtcfQ61164 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CtcfQ61164 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CtcfQ61164 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 AC132336.1-201ENSMUST00000222844 1740 ntBASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CtcfQ61164 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
CtcfQ61164 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
CtcfQ61164 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CtcfQ61164 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CtcfQ61164 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CtcfQ61164 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Gm24608-201ENSMUST00000104381 136 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Gm25773-201ENSMUST00000116718 127 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Gm4596-201ENSMUST00000117197 442 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Gm12112-201ENSMUST00000117772 231 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Gm14007-201ENSMUST00000118288 210 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CtcfQ61164 Gm11262-201ENSMUST00000119326 833 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Gm14559-201ENSMUST00000121745 496 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CtcfQ61164 Gm24444-201ENSMUST00000157244 308 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Gm25665-201ENSMUST00000157695 110 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CtcfQ61164 Gm18604-201ENSMUST00000172535 558 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Gm13249-201ENSMUST00000177803 345 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CtcfQ61164 Gm13144-201ENSMUST00000179385 345 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 Gm27834-201ENSMUST00000183427 125 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CtcfQ61164 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.56□□□□□ -1.68
CtcfQ61164 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CtcfQ61164 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.56□□□□□ -1.68
CtcfQ61164 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.56□□□□□ -1.68
CtcfQ61164 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms