Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm40020-201ENSMUST00000215677 1635 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm15018-201ENSMUST00000117090 633 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm12788-201ENSMUST00000119090 308 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm13973-201ENSMUST00000121371 894 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm14810-201ENSMUST00000121628 486 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm16471-201ENSMUST00000121940 618 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm25105-201ENSMUST00000122477 130 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm9775-201ENSMUST00000189402 331 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm17781-201ENSMUST00000195232 649 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm45063-201ENSMUST00000203726 472 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm6064-201ENSMUST00000203999 454 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm34272-201ENSMUST00000208886 253 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Gm4036-201ENSMUST00000220842 626 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 CT030705.1-201ENSMUST00000223971 533 ntBASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm12010-201ENSMUST00000122400 2017 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm14050-201ENSMUST00000117052 346 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm12722-201ENSMUST00000118507 493 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm25967-201ENSMUST00000157168 147 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm23540-201ENSMUST00000157543 164 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm25427-201ENSMUST00000157605 103 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm23592-201ENSMUST00000157859 117 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm26355-201ENSMUST00000158220 105 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm23775-201ENSMUST00000158991 249 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm23633-201ENSMUST00000175293 119 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm27033-201ENSMUST00000183226 544 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm28030-201ENSMUST00000184987 138 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm44355-201ENSMUST00000200417 104 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm43090-201ENSMUST00000202459 314 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm44016-201ENSMUST00000203463 164 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm2059-201ENSMUST00000212025 287 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm18388-201ENSMUST00000222339 557 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 AC154441.1-201ENSMUST00000223653 1006 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 AC187103.4-202ENSMUST00000225091 230 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 AC133101.1-201ENSMUST00000226939 1199 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm22304-201ENSMUST00000082688 129 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Mir132-201ENSMUST00000083603 66 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 Gm37983-201ENSMUST00000193207 2006 ntBASIC2.97□□□□□ -1.93
Trav5d-4Q5R1F6 AC158921.1-201ENSMUST00000227861 3468 ntBASIC2.96□□□□□ -1.93
Trav5d-4Q5R1F6 Gm6982-201ENSMUST00000118752 1560 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm37674-201ENSMUST00000194177 1834 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm12427-201ENSMUST00000117719 302 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm11890-201ENSMUST00000119585 417 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm12998-201ENSMUST00000122445 789 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm23666-201ENSMUST00000158053 116 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm16353-201ENSMUST00000159458 1223 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm5473-201ENSMUST00000179326 642 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm4854-201ENSMUST00000185902 574 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm28148-201ENSMUST00000186924 697 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm38334-201ENSMUST00000195060 313 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Gm37290-201ENSMUST00000195775 339 ntBASIC2.96□□□□□ -1.94
Trav5d-4Q5R1F6 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms