Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm3025-201ENSMUST00000163454 489 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gm2878-201ENSMUST00000170173 486 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gm29013-201ENSMUST00000187431 237 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gm38268-201ENSMUST00000195813 193 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gm34779-201ENSMUST00000210036 263 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
Trim58Q5NCC9 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Gm25630-201ENSMUST00000084000 162 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim58Q5NCC9 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm14811-201ENSMUST00000117070 117 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm14768-201ENSMUST00000122126 678 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm22789-201ENSMUST00000157884 130 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm24854-201ENSMUST00000158025 98 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm17177-201ENSMUST00000169144 483 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm24819-201ENSMUST00000175094 166 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Mir6914-201ENSMUST00000184999 69 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm18843-201ENSMUST00000194982 719 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm19243-201ENSMUST00000198592 269 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm44865-201ENSMUST00000207240 531 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Platr25-208ENSMUST00000222602 939 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 AC192088.2-201ENSMUST00000227590 411 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim58Q5NCC9 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm44897-201ENSMUST00000206187 1341 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Gm42534-201ENSMUST00000196063 1754 ntBASIC4.34□□□□□ -1.71
Trim58Q5NCC9 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
Trim58Q5NCC9 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.34□□□□□ -1.72
Trim58Q5NCC9 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.34□□□□□ -1.72
Trim58Q5NCC9 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Anp32-ps-201ENSMUST00000118265 388 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Gm25669-201ENSMUST00000157699 112 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Gm26171-201ENSMUST00000158422 131 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Gm26141-201ENSMUST00000175299 126 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Gm37934-201ENSMUST00000192902 402 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Gm43476-201ENSMUST00000197873 405 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Gm19219-201ENSMUST00000215863 724 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Gm18921-201ENSMUST00000221798 366 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.33□□□□□ -1.72
Trim58Q5NCC9 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.33□□□□□ -1.72
Trim58Q5NCC9 AC118006.2-201ENSMUST00000224167 962 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 AC154419.1-201ENSMUST00000227627 272 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Mir132-201ENSMUST00000083603 66 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim58Q5NCC9 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim58Q5NCC9 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Gm15060-201ENSMUST00000119550 948 ntBASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim58Q5NCC9 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Gm24961-201ENSMUST00000157918 184 ntBASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Mir3104-201ENSMUST00000174911 63 ntBASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Gm18486-201ENSMUST00000184040 298 ntBASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Mir6398-201ENSMUST00000184541 102 ntBASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Gm28141-201ENSMUST00000186676 342 ntBASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Ighv8-1-201ENSMUST00000194897 291 ntBASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Gm43227-201ENSMUST00000202239 677 ntBASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim58Q5NCC9 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Gm18120-201ENSMUST00000220079 511 ntBASIC4.32□□□□□ -1.72
Trim58Q5NCC9 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.32□□□□□ -1.72
Trim58Q5NCC9 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim58Q5NCC9 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms