Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm13435-201ENSMUST00000120111 1023 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm11200-201ENSMUST00000121698 448 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm26412-201ENSMUST00000157666 55 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm23872-201ENSMUST00000175432 77 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm27611-201ENSMUST00000184690 108 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm33952-201ENSMUST00000197795 408 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm43968-201ENSMUST00000203388 389 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm19131-201ENSMUST00000203408 789 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm45246-201ENSMUST00000210820 367 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm19326-201ENSMUST00000219818 326 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Olfr151-202ENSMUST00000221099 929 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 AC098719.1-201ENSMUST00000228920 371 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm5215-201ENSMUST00000054380 405 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Gm44829-201ENSMUST00000208008 3193 ntBASIC9.67□□□□□ -0.86
Trim41Q5NCC3 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Gm42923-201ENSMUST00000198438 2896 ntBASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Gm25430-201ENSMUST00000157614 289 ntBASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Gm22916-201ENSMUST00000157616 119 ntBASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Mir7012-201ENSMUST00000183900 64 ntBASIC9.66□□□□□ -0.86
Trim41Q5NCC3 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC9.66□□□□□ -0.86
Trim41Q5NCC3 AC165347.1-201ENSMUST00000224089 1025 ntBASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 AC125532.1-201ENSMUST00000216210 2334 ntBASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim41Q5NCC3 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm37846-201ENSMUST00000191840 3774 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 AC132852.1-201ENSMUST00000214683 2324 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm25291-201ENSMUST00000122795 144 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm9830-201ENSMUST00000178509 357 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm26928-201ENSMUST00000182674 572 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Mir6400-201ENSMUST00000184870 92 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm29397-201ENSMUST00000185205 333 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm37421-201ENSMUST00000193088 132 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm7871-201ENSMUST00000195346 618 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm45146-201ENSMUST00000207108 221 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm23511-201ENSMUST00000083084 164 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Gm25792-201ENSMUST00000083289 100 ntBASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim41Q5NCC3 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim41Q5NCC3 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim41Q5NCC3 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim41Q5NCC3 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Trim41Q5NCC3 Gm37249-201ENSMUST00000195185 2869 ntBASIC9.65□□□□□ -0.87
Trim41Q5NCC3 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Trim41Q5NCC3 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC9.65□□□□□ -0.87
Trim41Q5NCC3 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Gm18757-201ENSMUST00000207938 3141 ntBASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Gm23836-201ENSMUST00000104434 129 ntBASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Mir6238-201ENSMUST00000184140 129 ntBASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Gm17951-201ENSMUST00000198536 496 ntBASIC9.64□□□□□ -0.87
Trim41Q5NCC3 AC153646.2-201ENSMUST00000220516 109 ntBASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Gm18921-201ENSMUST00000221798 366 ntBASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Mir129-1-201ENSMUST00000083535 73 ntBASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim41Q5NCC3 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms