Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 Gm11970-201ENSMUST00000116105 320 ntBASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 Gm12677-201ENSMUST00000118668 426 ntBASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 Gm20162-201ENSMUST00000193629 871 ntBASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 Gm44964-201ENSMUST00000207011 273 ntBASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 Gm37887-201ENSMUST00000192752 2716 ntBASIC5.42□□□□□ -1.54
Ccdc88bQ4QRL3 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Gm18719-201ENSMUST00000196696 1413 ntBASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Gm42446-201ENSMUST00000199783 3284 ntBASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Gm18520-201ENSMUST00000174783 658 ntBASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Gm30534-201ENSMUST00000217928 207 ntBASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Gm22043-201ENSMUST00000082993 158 ntBASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Gm44842-201ENSMUST00000209173 3372 ntBASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ccdc88bQ4QRL3 Gm44789-201ENSMUST00000207195 3101 ntBASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Gm12118-201ENSMUST00000119766 532 ntBASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Gm14649-201ENSMUST00000121814 324 ntBASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Gm4222-201ENSMUST00000165784 470 ntBASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Gm42919-201ENSMUST00000197753 1284 ntBASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 AC155839.1-201ENSMUST00000200105 147 ntBASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Gm35405-201ENSMUST00000218754 400 ntBASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 AC123618.1-201ENSMUST00000220174 360 ntBASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 AC138401.2-201ENSMUST00000220461 365 ntBASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Gm6562-201ENSMUST00000221903 464 ntBASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ccdc88bQ4QRL3 Gm9343-201ENSMUST00000209016 2609 ntBASIC5.4□□□□□ -1.55
Ccdc88bQ4QRL3 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc88bQ4QRL3 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ccdc88bQ4QRL3 Gm16216-201ENSMUST00000118970 1111 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm22099-201ENSMUST00000157925 123 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm25707-201ENSMUST00000175120 96 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm20656-201ENSMUST00000176925 518 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 AC139376.1-201ENSMUST00000220056 1250 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21842-201ENSMUST00000177552 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21626-201ENSMUST00000177791 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21562-201ENSMUST00000177888 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21539-201ENSMUST00000177925 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm17522-201ENSMUST00000178144 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21599-201ENSMUST00000178249 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21914-201ENSMUST00000178452 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21723-201ENSMUST00000178692 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21916-201ENSMUST00000178771 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21801-201ENSMUST00000178865 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21633-201ENSMUST00000178941 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm17412-201ENSMUST00000179261 468 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21821-201ENSMUST00000179646 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21588-201ENSMUST00000180074 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21780-201ENSMUST00000180128 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21572-201ENSMUST00000180134 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm21529-201ENSMUST00000180175 498 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm29370-202ENSMUST00000187476 499 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm9379-201ENSMUST00000196790 646 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm43214-201ENSMUST00000199242 352 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 CT010444.1-201ENSMUST00000219963 3845 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC5.39□□□□□ -1.55
Ccdc88bQ4QRL3 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.38□□□□□ -1.55
Ccdc88bQ4QRL3 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms