Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm27033-201ENSMUST00000183226 544 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm28625-201ENSMUST00000188309 205 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm38280-201ENSMUST00000192610 158 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm2314-201ENSMUST00000200391 586 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm7443-201ENSMUST00000206355 378 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm35857-201ENSMUST00000212739 178 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 AC174797.4-201ENSMUST00000225510 347 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.7□□□□□ -1.82
Trafd1Q3UDK1 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm6797-201ENSMUST00000119440 512 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm14570-201ENSMUST00000119444 391 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm11600-201ENSMUST00000119592 240 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm14564-201ENSMUST00000122159 294 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm10067-201ENSMUST00000179462 348 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Mir7658-201ENSMUST00000184043 57 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Mir7047-201ENSMUST00000184595 64 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm29408-201ENSMUST00000187536 216 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm37098-201ENSMUST00000192290 244 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm42758-201ENSMUST00000202146 283 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm18855-201ENSMUST00000206689 570 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm9373-201ENSMUST00000208724 599 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm45553-201ENSMUST00000209929 507 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm25800-201ENSMUST00000082636 134 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm22444-201ENSMUST00000093693 108 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trafd1Q3UDK1 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm25313-201ENSMUST00000101817 116 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm8475-201ENSMUST00000118211 526 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Mup-ps1-201ENSMUST00000120720 544 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm14977-201ENSMUST00000121626 812 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm24059-201ENSMUST00000157493 312 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm25436-201ENSMUST00000158275 145 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm24930-201ENSMUST00000158315 83 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm23819-201ENSMUST00000158744 109 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm22646-201ENSMUST00000175130 115 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm25748-201ENSMUST00000175487 70 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm25817-201ENSMUST00000177758 121 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm24766-201ENSMUST00000179182 121 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm23287-201ENSMUST00000179427 116 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm23143-201ENSMUST00000180137 116 ntBASIC3.68□□□□□ -1.82
Trafd1Q3UDK1 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 125.9 ms