Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm37001-201ENSMUST00000193377 190 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm37290-201ENSMUST00000195775 339 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm8106-201ENSMUST00000213123 523 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm34005-201ENSMUST00000215834 282 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm7530-201ENSMUST00000218466 605 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm5518-201ENSMUST00000084171 648 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trim43aQ3TL54 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm11869-201ENSMUST00000118701 329 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm14687-201ENSMUST00000120206 363 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm14810-201ENSMUST00000121628 486 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm22889-201ENSMUST00000158639 58 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm36934-201ENSMUST00000192007 306 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm37431-201ENSMUST00000195102 111 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm22897-201ENSMUST00000197860 128 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm43975-201ENSMUST00000203023 481 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.79□□□□□ -1.8
Trim43aQ3TL54 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm18507-201ENSMUST00000218855 525 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 CT030194.2-201ENSMUST00000225752 379 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Gm10212-201ENSMUST00000087884 324 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim43aQ3TL54 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.79□□□□□ -1.8
Trim43aQ3TL54 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm25833-201ENSMUST00000104137 133 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm15268-201ENSMUST00000118845 352 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm13228-201ENSMUST00000118937 634 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm11890-201ENSMUST00000119585 417 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm15157-201ENSMUST00000121852 702 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm26276-201ENSMUST00000157099 109 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm25967-201ENSMUST00000157168 147 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm25520-201ENSMUST00000158389 118 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm20399-201ENSMUST00000174652 132 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm22646-201ENSMUST00000175130 115 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm28803-201ENSMUST00000190385 764 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm37343-201ENSMUST00000192542 111 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm42926-201ENSMUST00000200496 697 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm5885-202ENSMUST00000203357 528 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Snora70-201ENSMUST00000083047 137 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.78□□□□□ -1.8
Trim43aQ3TL54 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.78□□□□□ -1.81
Trim43aQ3TL54 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Gm14885-201ENSMUST00000117969 496 ntBASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Gm12335-201ENSMUST00000119738 327 ntBASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Gm12755-201ENSMUST00000122297 282 ntBASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Gm26933-201ENSMUST00000182320 827 ntBASIC3.77□□□□□ -1.81
Trim43aQ3TL54 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim43aQ3TL54 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms