Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm7897-201ENSMUST00000193981 554 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm38098-201ENSMUST00000194115 241 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm42438-201ENSMUST00000197832 974 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.8□□□□□ -1.8
Ptchd3Q0EEE2 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm25726-201ENSMUST00000104529 129 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm13737-201ENSMUST00000119793 232 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm16053-201ENSMUST00000120511 188 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm15075-201ENSMUST00000122187 477 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm16327-201ENSMUST00000137146 228 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm23023-201ENSMUST00000158767 109 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm15974-201ENSMUST00000159103 531 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm17155-201ENSMUST00000165969 473 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm5929-201ENSMUST00000166883 487 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm18397-201ENSMUST00000176704 587 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm23215-201ENSMUST00000178153 121 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm8641-201ENSMUST00000186995 826 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm28594-201ENSMUST00000187022 661 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm37088-201ENSMUST00000193887 406 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm42451-201ENSMUST00000197410 244 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm43651-201ENSMUST00000199796 439 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm44332-201ENSMUST00000203712 433 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm17989-201ENSMUST00000211543 412 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Gm17917-201ENSMUST00000218561 953 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ptchd3Q0EEE2 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Mir761-201ENSMUST00000103245 76 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm25097-201ENSMUST00000104042 145 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm22657-201ENSMUST00000104197 132 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm26387-201ENSMUST00000104238 132 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm24318-201ENSMUST00000104490 131 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Snora64-201ENSMUST00000104521 134 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm24855-201ENSMUST00000104848 97 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm25913-201ENSMUST00000157617 135 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm24875-201ENSMUST00000158888 104 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm16147-201ENSMUST00000162143 373 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm17038-201ENSMUST00000166586 494 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm27538-201ENSMUST00000185065 294 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm5731-201ENSMUST00000190969 481 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm9238-201ENSMUST00000196181 329 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm42516-201ENSMUST00000198691 767 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm19131-201ENSMUST00000203408 789 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Gm17780-201ENSMUST00000207142 612 ntBASIC3.78□□□□□ -1.8
Ptchd3Q0EEE2 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms