Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 CT485607.2-201ENSMUST00000214650 91 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm46194-201ENSMUST00000218136 320 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC6.14□□□□□ -1.43
Col9a1Q05722 AC172751.1-201ENSMUST00000226887 440 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Mir17-201ENSMUST00000083574 84 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm23041-201ENSMUST00000083868 106 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col9a1Q05722 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Col9a1Q05722 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col9a1Q05722 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm37174-201ENSMUST00000194699 3058 ntBASIC6.14□□□□□ -1.43
Col9a1Q05722 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col9a1Q05722 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col9a1Q05722 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm43888-201ENSMUST00000204405 2587 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm12820-201ENSMUST00000119233 342 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm12237-201ENSMUST00000120158 470 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm11819-201ENSMUST00000122192 372 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm22984-201ENSMUST00000122751 122 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm22059-201ENSMUST00000157544 104 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm24876-201ENSMUST00000158780 92 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm16303-201ENSMUST00000161498 390 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm43235-201ENSMUST00000200121 297 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm44108-201ENSMUST00000203525 422 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm44648-201ENSMUST00000208267 329 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm45249-201ENSMUST00000211021 348 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 LOC667541-201ENSMUST00000223408 278 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 AC130536.1-201ENSMUST00000224425 271 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 AC124562.1-201ENSMUST00000224673 337 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm10064-201ENSMUST00000071235 399 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm25078-201ENSMUST00000082530 107 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm45557-201ENSMUST00000210004 1651 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.13□□□□□ -1.43
Col9a1Q05722 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col9a1Q05722 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col9a1Q05722 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.12□□□□□ -1.43
Col9a1Q05722 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col9a1Q05722 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col9a1Q05722 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.12□□□□□ -1.43
Col9a1Q05722 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col9a1Q05722 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col9a1Q05722 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col9a1Q05722 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col9a1Q05722 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col9a1Q05722 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col9a1Q05722 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col9a1Q05722 Gm24263-201ENSMUST00000104059 107 ntBASIC6.12□□□□□ -1.43
Col9a1Q05722 Gm26079-201ENSMUST00000104066 133 ntBASIC6.12□□□□□ -1.43
Col9a1Q05722 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col9a1Q05722 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.12□□□□□ -1.43
Col9a1Q05722 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms