Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm6893-201ENSMUST00000118385 522 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm13737-201ENSMUST00000119793 232 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm12190-201ENSMUST00000120001 187 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm5060-201ENSMUST00000120072 599 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm14736-201ENSMUST00000121470 336 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm12110-201ENSMUST00000121601 579 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC4.52□□□□□ -1.69
Col8a1Q00780 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm2020-201ENSMUST00000145242 579 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm24186-201ENSMUST00000157983 127 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm22725-201ENSMUST00000158092 110 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm3470-201ENSMUST00000160819 420 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm4854-201ENSMUST00000185902 574 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm19202-201ENSMUST00000198096 808 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm6051-201ENSMUST00000201529 352 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm18194-201ENSMUST00000210455 481 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 AC138290.2-201ENSMUST00000218822 369 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm31849-201ENSMUST00000220306 375 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm5215-201ENSMUST00000054380 405 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 Snord42a-201ENSMUST00000082606 65 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm22572-201ENSMUST00000082985 105 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm37101-201ENSMUST00000191656 3660 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.52□□□□□ -1.69
Col8a1Q00780 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col8a1Q00780 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col8a1Q00780 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col8a1Q00780 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col8a1Q00780 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col8a1Q00780 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col8a1Q00780 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Mir466i-201ENSMUST00000116924 121 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm13510-201ENSMUST00000118659 429 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm7429-201ENSMUST00000118664 348 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm12787-201ENSMUST00000119234 396 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm12155-201ENSMUST00000121267 160 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm12854-201ENSMUST00000128518 297 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm24857-201ENSMUST00000158061 310 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm24217-201ENSMUST00000158260 133 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm22085-201ENSMUST00000158344 110 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm25671-201ENSMUST00000178612 105 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm22851-201ENSMUST00000178741 94 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm23307-201ENSMUST00000179167 105 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm25286-201ENSMUST00000179790 105 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm27976-201ENSMUST00000183635 162 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm27676-201ENSMUST00000183669 61 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm43723-201ENSMUST00000196886 189 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 AC155808.1-201ENSMUST00000219288 409 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.51□□□□□ -1.69
Col8a1Q00780 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm7665-201ENSMUST00000076710 297 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm23927-201ENSMUST00000082466 215 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm24207-201ENSMUST00000082781 108 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm26206-201ENSMUST00000082908 110 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm23972-201ENSMUST00000083322 165 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col8a1Q00780 Gm37137-201ENSMUST00000195138 2684 ntBASIC4.51□□□□□ -1.69
Col8a1Q00780 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms