Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 AC166369.2-201ENSMUST00000228403 308 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sf3b6P59708 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.8□□□□□ -1.64
Sf3b6P59708 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sf3b6P59708 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sf3b6P59708 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sf3b6P59708 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sf3b6P59708 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sf3b6P59708 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sf3b6P59708 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sf3b6P59708 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sf3b6P59708 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm16106-201ENSMUST00000119187 294 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm14647-201ENSMUST00000119392 680 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm12244-201ENSMUST00000119500 291 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm8545-201ENSMUST00000120692 801 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm25339-201ENSMUST00000157458 232 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm24240-201ENSMUST00000157785 135 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm24537-201ENSMUST00000157950 102 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm9006-201ENSMUST00000165520 841 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm25671-201ENSMUST00000178612 105 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm23307-201ENSMUST00000179167 105 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm24464-201ENSMUST00000179697 107 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm25286-201ENSMUST00000179790 105 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm26746-201ENSMUST00000181722 487 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm27190-201ENSMUST00000184890 542 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm37609-201ENSMUST00000191778 678 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm45857-201ENSMUST00000212207 356 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm45814-201ENSMUST00000212646 775 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm7540-201ENSMUST00000219764 926 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sf3b6P59708 AV026068-237ENSMUST00000226075 572 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sf3b6P59708 Snord42a-201ENSMUST00000082606 65 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm23677-201ENSMUST00000083156 104 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm24764-201ENSMUST00000083686 199 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sf3b6P59708 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Sf3b6P59708 Gm11885-201ENSMUST00000118473 1428 ntBASIC4.79□□□□□ -1.64
Sf3b6P59708 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sf3b6P59708 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Sf3b6P59708 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sf3b6P59708 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sf3b6P59708 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Sf3b6P59708 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sf3b6P59708 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm15772-201ENSMUST00000118533 438 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm11313-201ENSMUST00000118779 432 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm14563-201ENSMUST00000120571 354 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm14926-201ENSMUST00000120650 508 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm22492-201ENSMUST00000157192 297 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm24784-201ENSMUST00000157640 62 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm22668-201ENSMUST00000158716 260 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm17148-201ENSMUST00000164702 249 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm24713-201ENSMUST00000178850 107 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm25448-201ENSMUST00000180065 107 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm8939-201ENSMUST00000192577 964 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm38076-201ENSMUST00000193889 450 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm44060-201ENSMUST00000204440 410 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Gm44720-201ENSMUST00000206076 260 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.78□□□□□ -1.64
Sf3b6P59708 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Sf3b6P59708 Mir298-201ENSMUST00000083476 82 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms