Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Rfx1P48377 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Rfx1P48377 Gm43654-201ENSMUST00000200664 3417 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Rfx1P48377 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Rfx1P48377 Gm22656-201ENSMUST00000104199 171 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm24275-201ENSMUST00000116780 146 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm14883-201ENSMUST00000120179 157 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm25176-201ENSMUST00000122640 125 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm5699-201ENSMUST00000152491 723 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Rfx1P48377 Gm18199-201ENSMUST00000173820 835 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Rfx1P48377 Gm22290-201ENSMUST00000177655 107 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm22583-201ENSMUST00000178031 107 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm27887-201ENSMUST00000184367 102 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm29490-201ENSMUST00000190923 342 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC6.09□□□□□ -1.43
Rfx1P48377 Gm42663-201ENSMUST00000199883 351 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm19649-201ENSMUST00000201126 822 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.09□□□□□ -1.43
Rfx1P48377 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.09□□□□□ -1.43
Rfx1P48377 Gm18120-201ENSMUST00000220079 511 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm23404-201ENSMUST00000082543 97 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm25853-201ENSMUST00000082793 132 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Gm26330-201ENSMUST00000082817 104 ntBASIC6.09□□□□□ -1.43
Rfx1P48377 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Rfx1P48377 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Rfx1P48377 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rfx1P48377 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rfx1P48377 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
Rfx1P48377 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC6.08□□□□□ -1.44
Rfx1P48377 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rfx1P48377 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Rfx1P48377 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.08□□□□□ -1.44
Rfx1P48377 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rfx1P48377 Gm24350-201ENSMUST00000104163 133 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm25560-201ENSMUST00000104606 176 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.08□□□□□ -1.44
Rfx1P48377 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Rfx1P48377 Gm7312-201ENSMUST00000118798 469 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm13064-201ENSMUST00000119125 557 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm13430-201ENSMUST00000121366 288 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm14736-201ENSMUST00000121470 336 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm9428-201ENSMUST00000127214 769 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC6.08□□□□□ -1.44
Rfx1P48377 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rfx1P48377 Gm23318-201ENSMUST00000158000 108 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm23224-201ENSMUST00000158122 271 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm24944-201ENSMUST00000158330 128 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm22136-201ENSMUST00000158751 268 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm23473-201ENSMUST00000158883 116 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Rfx1P48377 Gm3851-201ENSMUST00000168653 318 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rfx1P48377 Gm17183-201ENSMUST00000171170 493 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm20526-201ENSMUST00000173416 158 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm25156-201ENSMUST00000179809 79 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Rfx1P48377 Gm27233-201ENSMUST00000184030 307 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC6.08□□□□□ -1.44
Rfx1P48377 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC6.08□□□□□ -1.44
Rfx1P48377 Gm37123-201ENSMUST00000192994 1171 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Mir7116-201ENSMUST00000195956 70 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rfx1P48377 Crs-ps-201ENSMUST00000203723 760 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC6.08□□□□□ -1.44
Rfx1P48377 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.08□□□□□ -1.44
Rfx1P48377 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Rfx1P48377 Gm23627-201ENSMUST00000082459 107 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm22502-201ENSMUST00000082488 107 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Gm24149-201ENSMUST00000082757 107 ntBASIC6.08□□□□□ -1.44
Rfx1P48377 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rfx1P48377 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rfx1P48377 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
Rfx1P48377 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC6.08□□□□□ -1.44
Rfx1P48377 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Rfx1P48377 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Rfx1P48377 CT009510.2-203ENSMUST00000226704 2136 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Rfx1P48377 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm13172-201ENSMUST00000118685 256 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm9308-201ENSMUST00000119073 448 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm11761-201ENSMUST00000121392 445 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm25781-201ENSMUST00000122527 84 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Rfx1P48377 Gm25714-201ENSMUST00000158626 296 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm24737-201ENSMUST00000158861 100 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm25445-201ENSMUST00000158996 299 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm3076-201ENSMUST00000161613 451 ntBASIC6.07□□□□□ -1.44
Rfx1P48377 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Rfx1P48377 Gm11395-201ENSMUST00000181011 499 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms