Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdx2P43241 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cdx2P43241 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Cdx2P43241 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cdx2P43241 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cdx2P43241 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cdx2P43241 Gm26145-201ENSMUST00000104476 127 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Gm11260-201ENSMUST00000121163 942 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Gm13743-201ENSMUST00000121486 724 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Gm22956-201ENSMUST00000122520 80 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.35□□□□□ -1.87
Cdx2P43241 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cdx2P43241 Gm24930-201ENSMUST00000158315 83 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.35□□□□□ -1.87
Cdx2P43241 Gm17177-201ENSMUST00000169144 483 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Gm27374-201ENSMUST00000183660 81 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Gm29104-201ENSMUST00000186304 222 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Gm7142-201ENSMUST00000194232 586 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Gm20177-201ENSMUST00000203705 334 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.35□□□□□ -1.87
Cdx2P43241 Gm35857-201ENSMUST00000212739 178 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.35□□□□□ -1.87
Cdx2P43241 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cdx2P43241 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cdx2P43241 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cdx2P43241 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cdx2P43241 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.34□□□□□ -1.87
Cdx2P43241 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cdx2P43241 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Cdx2P43241 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Cdx2P43241 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cdx2P43241 Gm11923-201ENSMUST00000118135 508 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 Gm11866-201ENSMUST00000120209 335 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 Gm16563-201ENSMUST00000162673 423 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cdx2P43241 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.34□□□□□ -1.87
Cdx2P43241 Gm26238-201ENSMUST00000175538 117 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 Gm22910-201ENSMUST00000178568 132 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cdx2P43241 Gm32340-201ENSMUST00000192883 259 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 Gm43930-201ENSMUST00000203868 845 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 AC107369.1-201ENSMUST00000227373 860 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cdx2P43241 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cdx2P43241 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.34□□□□□ -1.87
Cdx2P43241 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cdx2P43241 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Cdx2P43241 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.34□□□□□ -1.88
Cdx2P43241 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.34□□□□□ -1.88
Cdx2P43241 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cdx2P43241 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.33□□□□□ -1.88
Cdx2P43241 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.33□□□□□ -1.88
Cdx2P43241 Gm13650-201ENSMUST00000117729 433 ntBASIC3.33□□□□□ -1.88
Cdx2P43241 Gm7308-201ENSMUST00000121087 447 ntBASIC3.33□□□□□ -1.88
Cdx2P43241 Gm13459-201ENSMUST00000121558 646 ntBASIC3.33□□□□□ -1.88
Cdx2P43241 Gm26027-201ENSMUST00000122725 268 ntBASIC3.33□□□□□ -1.88
Cdx2P43241 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cdx2P43241 Gm25438-201ENSMUST00000158281 110 ntBASIC3.33□□□□□ -1.88
Cdx2P43241 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cdx2P43241 Gm44343-201ENSMUST00000196702 90 ntBASIC3.33□□□□□ -1.88
Cdx2P43241 Gm44817-201ENSMUST00000205416 453 ntBASIC3.33□□□□□ -1.88
Cdx2P43241 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.33□□□□□ -1.88
Cdx2P43241 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.33□□□□□ -1.88
Cdx2P43241 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cdx2P43241 Snord35b-201ENSMUST00000082833 87 ntBASIC3.33□□□□□ -1.88
Cdx2P43241 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.33□□□□□ -1.88
Cdx2P43241 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cdx2P43241 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cdx2P43241 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cdx2P43241 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Cdx2P43241 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cdx2P43241 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Cdx2P43241 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cdx2P43241 Gm25308-201ENSMUST00000104171 158 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm15231-201ENSMUST00000119174 447 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm13873-201ENSMUST00000119208 427 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm14240-201ENSMUST00000120353 546 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm26100-201ENSMUST00000157245 127 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm27535-201ENSMUST00000183814 157 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm6947-201ENSMUST00000186254 78 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm37081-201ENSMUST00000192034 196 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm38080-201ENSMUST00000194035 268 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.32□□□□□ -1.88
Cdx2P43241 Gm2691-201ENSMUST00000203205 901 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdx2P43241 Gm44703-201ENSMUST00000205724 248 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdx2P43241 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cdx2P43241 Gm39147-201ENSMUST00000211376 465 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm45409-201ENSMUST00000211486 252 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cdx2P43241 Gm6991-201ENSMUST00000218475 1178 ntBASIC3.32□□□□□ -1.88
Cdx2P43241 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms