Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.36□□□□□ -1.87
HttP42859 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.36□□□□□ -1.87
HttP42859 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.36□□□□□ -1.87
HttP42859 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HttP42859 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.36□□□□□ -1.87
HttP42859 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HttP42859 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.36□□□□□ -1.87
HttP42859 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.36□□□□□ -1.87
HttP42859 Gm4017-201ENSMUST00000084813 338 ntBASIC3.36□□□□□ -1.87
HttP42859 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HttP42859 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HttP42859 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.35□□□□□ -1.87
HttP42859 Gm28492-201ENSMUST00000190899 1019 ntBASIC3.35□□□□□ -1.87
HttP42859 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.35□□□□□ -1.87
HttP42859 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC3.35□□□□□ -1.87
HttP42859 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.35□□□□□ -1.87
HttP42859 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HttP42859 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HttP42859 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
HttP42859 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HttP42859 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.35□□□□□ -1.87
HttP42859 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.35□□□□□ -1.87
HttP42859 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HttP42859 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HttP42859 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.35□□□□□ -1.87
HttP42859 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HttP42859 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HttP42859 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HttP42859 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC3.35□□□□□ -1.87
HttP42859 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HttP42859 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.35□□□□□ -1.87
HttP42859 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.35□□□□□ -1.87
HttP42859 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.35□□□□□ -1.87
HttP42859 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HttP42859 Gm21893-201ENSMUST00000179119 397 ntBASIC3.35□□□□□ -1.87
HttP42859 Gm45845-201ENSMUST00000207326 582 ntBASIC3.35□□□□□ -1.87
HttP42859 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC3.35□□□□□ -1.87
HttP42859 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.35□□□□□ -1.87
HttP42859 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HttP42859 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HttP42859 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HttP42859 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.34□□□□□ -1.87
HttP42859 Mir5123-201ENSMUST00000177794 83 ntBASIC3.34□□□□□ -1.87
HttP42859 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HttP42859 Gm29148-201ENSMUST00000188140 336 ntBASIC3.34□□□□□ -1.87
HttP42859 Gm29330-201ENSMUST00000190032 699 ntBASIC3.34□□□□□ -1.87
HttP42859 Gm28098-201ENSMUST00000191361 699 ntBASIC3.34□□□□□ -1.87
HttP42859 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.34□□□□□ -1.87
HttP42859 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.34□□□□□ -1.87
HttP42859 Gm6230-201ENSMUST00000208077 780 ntBASIC3.34□□□□□ -1.87
HttP42859 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
HttP42859 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
HttP42859 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
HttP42859 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HttP42859 Gm8880-201ENSMUST00000121800 454 ntBASIC3.34□□□□□ -1.88
HttP42859 Mir7669-201ENSMUST00000183442 58 ntBASIC3.34□□□□□ -1.88
HttP42859 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.34□□□□□ -1.88
HttP42859 Gm26494-201ENSMUST00000083154 143 ntBASIC3.34□□□□□ -1.88
HttP42859 Gm24493-201ENSMUST00000083805 143 ntBASIC3.34□□□□□ -1.88
HttP42859 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
HttP42859 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
HttP42859 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.34□□□□□ -1.88
HttP42859 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HttP42859 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HttP42859 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC3.33□□□□□ -1.88
HttP42859 Gm23951-201ENSMUST00000104029 132 ntBASIC3.33□□□□□ -1.88
HttP42859 AC127371.1-201ENSMUST00000228516 312 ntBASIC3.33□□□□□ -1.88
HttP42859 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.33□□□□□ -1.88
HttP42859 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC3.33□□□□□ -1.88
HttP42859 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HttP42859 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HttP42859 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
HttP42859 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC3.33□□□□□ -1.88
HttP42859 Mir7026-201ENSMUST00000184384 67 ntBASIC3.33□□□□□ -1.88
HttP42859 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.33□□□□□ -1.88
HttP42859 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.33□□□□□ -1.88
HttP42859 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
HttP42859 Gm45013-201ENSMUST00000206883 178 ntBASIC3.33□□□□□ -1.88
HttP42859 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.33□□□□□ -1.88
HttP42859 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HttP42859 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HttP42859 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
HttP42859 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
HttP42859 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HttP42859 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.33□□□□□ -1.88
HttP42859 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC3.33□□□□□ -1.88
HttP42859 Gm9435-201ENSMUST00000120379 877 ntBASIC3.33□□□□□ -1.88
HttP42859 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC3.33□□□□□ -1.88
HttP42859 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC3.33□□□□□ -1.88
HttP42859 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.33□□□□□ -1.88
HttP42859 Gm15795-201ENSMUST00000160969 553 ntBASIC3.33□□□□□ -1.88
HttP42859 Gm19104-201ENSMUST00000198392 679 ntBASIC3.33□□□□□ -1.88
HttP42859 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.33□□□□□ -1.88
HttP42859 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.33□□□□□ -1.88
HttP42859 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HttP42859 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HttP42859 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HttP42859 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HttP42859 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HttP42859 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms