Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Msx1P13297 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Msx1P13297 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Msx1P13297 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Msx1P13297 Gm8935-202ENSMUST00000105727 1959 ntBASIC5.75□□□□□ -1.49
Msx1P13297 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Msx1P13297 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.74□□□□□ -1.49
Msx1P13297 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Msx1P13297 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Msx1P13297 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.74□□□□□ -1.49
Msx1P13297 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Msx1P13297 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Msx1P13297 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Msx1P13297 Gm23422-201ENSMUST00000102000 107 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Gm16125-201ENSMUST00000159003 339 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Mir3110-201ENSMUST00000175053 80 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Mir6986-201ENSMUST00000184483 58 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Gm2325-201ENSMUST00000186637 581 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Gm6137-201ENSMUST00000187552 578 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Gm37838-201ENSMUST00000194464 312 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Msx1P13297 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC5.74□□□□□ -1.49
Msx1P13297 Gm5027-201ENSMUST00000206700 375 ntBASIC5.74□□□□□ -1.49
Msx1P13297 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.74□□□□□ -1.49
Msx1P13297 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.74□□□□□ -1.49
Msx1P13297 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Msx1P13297 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Msx1P13297 Gm22300-201ENSMUST00000082661 126 ntBASIC5.74□□□□□ -1.49
Msx1P13297 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Msx1P13297 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Msx1P13297 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.74□□□□□ -1.49
Msx1P13297 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Msx1P13297 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Msx1P13297 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.74□□□□□ -1.49
Msx1P13297 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Msx1P13297 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.74□□□□□ -1.49
Msx1P13297 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Msx1P13297 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Msx1P13297 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Msx1P13297 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Msx1P13297 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Msx1P13297 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Msx1P13297 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.73□□□□□ -1.49
Msx1P13297 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Msx1P13297 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Msx1P13297 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Msx1P13297 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Msx1P13297 Gm25345-201ENSMUST00000104505 133 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm23910-201ENSMUST00000104597 132 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm11970-201ENSMUST00000116105 320 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm13493-201ENSMUST00000120318 493 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.73□□□□□ -1.49
Msx1P13297 Gm23954-201ENSMUST00000157213 353 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm25906-201ENSMUST00000158489 126 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm23179-201ENSMUST00000158693 304 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm23050-201ENSMUST00000158775 165 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Msx1P13297 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Msx1P13297 Gm20545-201ENSMUST00000174739 210 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm22932-201ENSMUST00000175510 72 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm26057-201ENSMUST00000178099 165 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm22917-201ENSMUST00000180116 110 ntBASIC5.73□□□□□ -1.49
Msx1P13297 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Msx1P13297 Mir6903-201ENSMUST00000183597 88 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm28883-201ENSMUST00000189256 369 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm29140-201ENSMUST00000190187 476 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm32158-201ENSMUST00000200135 404 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC5.73□□□□□ -1.49
Msx1P13297 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.73□□□□□ -1.49
Msx1P13297 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.73□□□□□ -1.49
Msx1P13297 AC154636.2-201ENSMUST00000222538 161 ntBASIC5.73□□□□□ -1.49
Msx1P13297 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Msx1P13297 Gm22704-201ENSMUST00000083027 137 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Msx1P13297 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Msx1P13297 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.73□□□□□ -1.49
Msx1P13297 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Msx1P13297 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Msx1P13297 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Msx1P13297 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Msx1P13297 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Msx1P13297 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Msx1P13297 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Msx1P13297 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms