Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Mir667-201ENSMUST00000102441 92 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lire1P11260 Gm14518-201ENSMUST00000117351 542 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm13386-201ENSMUST00000117677 124 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm12383-201ENSMUST00000120628 760 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm25047-201ENSMUST00000122667 104 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm5958-201ENSMUST00000147698 297 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm24507-201ENSMUST00000157683 134 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm24751-201ENSMUST00000157844 102 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.11□□□□□ -1.75
Lire1P11260 Gm19807-201ENSMUST00000173971 667 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lire1P11260 Mir6414-201ENSMUST00000183685 82 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Mir6401-201ENSMUST00000184499 109 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm43580-201ENSMUST00000202892 284 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm33626-201ENSMUST00000206790 828 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Gm45273-201ENSMUST00000211559 281 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.11□□□□□ -1.75
Lire1P11260 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC4.11□□□□□ -1.75
Lire1P11260 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Lire1P11260 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC4.11□□□□□ -1.75
Lire1P11260 Gm18442-201ENSMUST00000220925 639 ntBASIC4.11□□□□□ -1.75
Lire1P11260 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.11□□□□□ -1.75
Lire1P11260 AC158388.1-201ENSMUST00000225441 256 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Lire1P11260 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Lire1P11260 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Lire1P11260 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lire1P11260 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Lire1P11260 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lire1P11260 Gm10780-201ENSMUST00000099459 285 ntBASIC4.11□□□□□ -1.75
Lire1P11260 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Lire1P11260 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lire1P11260 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.11□□□□□ -1.75
Lire1P11260 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Lire1P11260 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lire1P11260 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lire1P11260 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lire1P11260 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lire1P11260 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lire1P11260 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lire1P11260 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lire1P11260 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lire1P11260 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Lire1P11260 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC4.1□□□□□ -1.75
Lire1P11260 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lire1P11260 Gm23273-201ENSMUST00000104058 135 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Lire1P11260 Gm23178-201ENSMUST00000116782 95 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Gm12994-201ENSMUST00000119601 447 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Gm22637-201ENSMUST00000158144 283 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Gm3077-201ENSMUST00000165903 627 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Gm7346-201ENSMUST00000169661 476 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.1□□□□□ -1.75
Lire1P11260 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Lire1P11260 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Gm17781-201ENSMUST00000195232 649 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Gm9379-201ENSMUST00000196790 646 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.1□□□□□ -1.75
Lire1P11260 Gm9373-201ENSMUST00000208724 599 ntBASIC4.1□□□□□ -1.75
Lire1P11260 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.1□□□□□ -1.75
Lire1P11260 AC153899.1-201ENSMUST00000214092 1117 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Gm18120-201ENSMUST00000220079 511 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Gm6988-201ENSMUST00000222676 375 ntBASIC4.1□□□□□ -1.75
Lire1P11260 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.1□□□□□ -1.75
Lire1P11260 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Lire1P11260 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Lire1P11260 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Lire1P11260 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Lire1P11260 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lire1P11260 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Lire1P11260 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Lire1P11260 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Lire1P11260 Gm22758-201ENSMUST00000102275 96 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm22472-201ENSMUST00000104115 134 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm16017-201ENSMUST00000119834 208 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm11718-201ENSMUST00000119942 537 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm22613-201ENSMUST00000122679 292 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC4.09□□□□□ -1.75
Lire1P11260 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm23905-201ENSMUST00000157568 109 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm22521-201ENSMUST00000158272 134 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm37817-201ENSMUST00000195276 434 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm44474-201ENSMUST00000196525 127 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm44343-201ENSMUST00000196702 90 ntBASIC4.09□□□□□ -1.75
Lire1P11260 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm44274-201ENSMUST00000203417 256 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Gm44656-201ENSMUST00000208428 490 ntBASIC4.09□□□□□ -1.75
Lire1P11260 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Lire1P11260 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Lire1P11260 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.09□□□□□ -1.75
Lire1P11260 Gm17829-201ENSMUST00000219782 344 ntBASIC4.09□□□□□ -1.75
Lire1P11260 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.09□□□□□ -1.75
Lire1P11260 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms