Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Gm3123-201ENSMUST00000163480 480 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Gm26141-201ENSMUST00000175299 126 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Gm25037-201ENSMUST00000175418 110 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Gm4479-201ENSMUST00000178807 171 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Gm6113-201ENSMUST00000180319 639 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Gm7634-201ENSMUST00000185778 553 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col3a1P08121 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col3a1P08121 AC111046.1-201ENSMUST00000217715 412 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Gm18039-201ENSMUST00000217816 728 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC4.45□□□□□ -1.7
Col3a1P08121 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col3a1P08121 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.45□□□□□ -1.7
Col3a1P08121 AC154636.3-201ENSMUST00000221489 1214 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Diaph3-206ENSMUST00000226745 713 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Vaultrc5-201ENSMUST00000083211 143 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col3a1P08121 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col3a1P08121 AC164297.4-201ENSMUST00000224225 1307 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col3a1P08121 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.45□□□□□ -1.7
Col3a1P08121 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col3a1P08121 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm15387-201ENSMUST00000120421 648 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Gm16005-201ENSMUST00000120515 269 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Gm14875-201ENSMUST00000120881 319 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Gm23429-201ENSMUST00000122486 149 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Gm22718-201ENSMUST00000122701 315 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col3a1P08121 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col3a1P08121 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Gm22698-201ENSMUST00000175375 108 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col3a1P08121 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col3a1P08121 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm5058-201ENSMUST00000187331 463 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Gm17771-201ENSMUST00000194477 1147 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm45080-201ENSMUST00000206648 283 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC4.44□□□□□ -1.7
Col3a1P08121 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.44□□□□□ -1.7
Col3a1P08121 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col3a1P08121 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.44□□□□□ -1.7
Col3a1P08121 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC4.44□□□□□ -1.7
Col3a1P08121 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm25630-201ENSMUST00000084000 162 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Gm5518-201ENSMUST00000084171 648 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col3a1P08121 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col3a1P08121 AC124426.1-203ENSMUST00000221814 1362 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Col3a1P08121 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.44□□□□□ -1.7
Col3a1P08121 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Col3a1P08121 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col3a1P08121 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col3a1P08121 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC4.43□□□□□ -1.7
Col3a1P08121 Gm23987-201ENSMUST00000117039 129 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 Gm14973-201ENSMUST00000117248 255 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 Gm12543-201ENSMUST00000120410 543 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col3a1P08121 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.43□□□□□ -1.7
Col3a1P08121 Gm24739-201ENSMUST00000158855 292 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.43□□□□□ -1.7
Col3a1P08121 Mir5128-201ENSMUST00000175217 84 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 Gm22254-201ENSMUST00000179186 110 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 Gm42164-201ENSMUST00000198881 379 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 Gm2189-201ENSMUST00000201419 429 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 Gm18861-201ENSMUST00000202509 1186 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 AC124542.1-201ENSMUST00000205588 908 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col3a1P08121 Gm18892-201ENSMUST00000217628 881 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC4.43□□□□□ -1.7
Col3a1P08121 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC4.43□□□□□ -1.7
Col3a1P08121 AC162857.1-201ENSMUST00000226614 400 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.43□□□□□ -1.7
Col3a1P08121 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col3a1P08121 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col3a1P08121 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col3a1P08121 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Col3a1P08121 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col3a1P08121 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col3a1P08121 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms