Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm14688-201ENSMUST00000119169 303 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm15387-201ENSMUST00000120421 648 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm24664-201ENSMUST00000158939 100 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm8161-201ENSMUST00000168739 481 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cbx4O55187 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm25412-201ENSMUST00000180258 107 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm27805-201ENSMUST00000184513 79 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm29556-201ENSMUST00000187591 696 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm29598-201ENSMUST00000188996 588 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm37164-201ENSMUST00000192809 637 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm43096-201ENSMUST00000196173 421 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm44765-201ENSMUST00000206927 601 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm45458-201ENSMUST00000209900 522 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm45240-201ENSMUST00000211437 674 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cbx4O55187 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm7119-201ENSMUST00000221345 695 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm46369-201ENSMUST00000221577 401 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 AC158521.1-201ENSMUST00000225295 660 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cbx4O55187 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Gm5518-201ENSMUST00000084171 648 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cbx4O55187 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
Cbx4O55187 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Cbx4O55187 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cbx4O55187 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.21□□□□□ -1.74
Cbx4O55187 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
Cbx4O55187 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cbx4O55187 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Cbx4O55187 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cbx4O55187 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cbx4O55187 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cbx4O55187 Mir669o-201ENSMUST00000103898 96 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm14899-201ENSMUST00000118673 548 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm11913-201ENSMUST00000119094 336 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm12379-201ENSMUST00000119607 391 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm13865-201ENSMUST00000120957 865 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm8200-201ENSMUST00000122390 222 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm26271-201ENSMUST00000158349 104 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm23025-201ENSMUST00000158769 111 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm3084-201ENSMUST00000169967 598 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cbx4O55187 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cbx4O55187 Gm27254-201ENSMUST00000183926 517 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Mir6943-201ENSMUST00000185186 66 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm29576-201ENSMUST00000188020 678 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.2□□□□□ -1.74
Cbx4O55187 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.2□□□□□ -1.74
Cbx4O55187 Gm18775-201ENSMUST00000190763 586 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm28354-201ENSMUST00000190904 678 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cbx4O55187 Gm45081-201ENSMUST00000206281 572 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm45200-201ENSMUST00000207434 919 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.2□□□□□ -1.74
Cbx4O55187 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.2□□□□□ -1.74
Cbx4O55187 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 AC112274.2-201ENSMUST00000218436 170 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.2□□□□□ -1.74
Cbx4O55187 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
Cbx4O55187 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.2□□□□□ -1.74
Cbx4O55187 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cbx4O55187 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Cbx4O55187 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms