Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Scn3aA2ASI5 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.7□□□□□ -1.82
Scn3aA2ASI5 Gm29556-201ENSMUST00000187591 696 ntBASIC3.7□□□□□ -1.82
Scn3aA2ASI5 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.7□□□□□ -1.82
Scn3aA2ASI5 Gm7948-201ENSMUST00000212607 844 ntBASIC3.7□□□□□ -1.82
Scn3aA2ASI5 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.7□□□□□ -1.82
Scn3aA2ASI5 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Scn3aA2ASI5 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Gm25669-201ENSMUST00000157699 112 ntBASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Gm28871-201ENSMUST00000186191 687 ntBASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Gm28196-201ENSMUST00000187719 640 ntBASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Gm42539-201ENSMUST00000197009 308 ntBASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Gm42758-201ENSMUST00000202146 283 ntBASIC3.69□□□□□ -1.82
Scn3aA2ASI5 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.69□□□□□ -1.82
Scn3aA2ASI5 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.69□□□□□ -1.82
Scn3aA2ASI5 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Mir1198-201ENSMUST00000116995 121 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm14647-201ENSMUST00000119392 680 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm24720-201ENSMUST00000157518 166 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm23116-201ENSMUST00000158481 67 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm32340-201ENSMUST00000192883 259 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm25203-202ENSMUST00000200458 216 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm25203-201ENSMUST00000082842 215 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm336-201ENSMUST00000186376 1480 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm22023-201ENSMUST00000104354 130 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm14576-201ENSMUST00000118073 1111 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm22956-201ENSMUST00000122520 80 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm2892-201ENSMUST00000145537 711 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm5552-201ENSMUST00000197149 515 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 AC126554.4-201ENSMUST00000221055 409 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm26129-201ENSMUST00000082719 107 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Gm10242-201ENSMUST00000090064 330 ntBASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Scn3aA2ASI5 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm26423-201ENSMUST00000104277 128 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm25539-201ENSMUST00000116886 122 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm6797-201ENSMUST00000119440 512 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm4540-201ENSMUST00000170669 429 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm21842-201ENSMUST00000177552 498 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm21626-201ENSMUST00000177791 498 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm21562-201ENSMUST00000177888 498 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm21539-201ENSMUST00000177925 498 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm17522-201ENSMUST00000178144 498 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm21599-201ENSMUST00000178249 498 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm21914-201ENSMUST00000178452 498 ntBASIC3.67□□□□□ -1.82
Scn3aA2ASI5 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms