Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm14103-201ENSMUST00000119075 366 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm15387-201ENSMUST00000120421 648 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Mir5112-201ENSMUST00000174897 60 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm36934-201ENSMUST00000192007 306 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Mir5121-201ENSMUST00000198528 74 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm5885-202ENSMUST00000203357 528 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm44475-201ENSMUST00000204041 424 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm20948-201ENSMUST00000211091 449 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm35857-201ENSMUST00000212739 178 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm6841-201ENSMUST00000220602 598 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 AC173345.3-201ENSMUST00000221245 1093 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm22868-201ENSMUST00000083955 164 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm5518-201ENSMUST00000084171 648 ntBASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
H2afb2S4R1M3 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm24935-201ENSMUST00000103770 110 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm26387-201ENSMUST00000104238 132 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm5942-201ENSMUST00000120046 439 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm11830-201ENSMUST00000120175 561 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm11387-201ENSMUST00000120266 772 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm6969-201ENSMUST00000140065 342 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm7634-201ENSMUST00000185778 553 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm42526-201ENSMUST00000198956 393 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Trav12-4-201ENSMUST00000200663 271 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.67□□□□□ -1.82
H2afb2S4R1M3 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
H2afb2S4R1M3 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm15090-201ENSMUST00000118787 1196 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm15089-201ENSMUST00000122332 1196 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm23257-201ENSMUST00000158322 132 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm23112-201ENSMUST00000158606 125 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm23816-201ENSMUST00000179617 132 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm27834-201ENSMUST00000183427 125 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm29408-201ENSMUST00000187536 216 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm28466-201ENSMUST00000190678 659 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm37343-201ENSMUST00000192542 111 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm37698-201ENSMUST00000192605 463 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm37599-201ENSMUST00000193067 489 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.66□□□□□ -1.82
H2afb2S4R1M3 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.66□□□□□ -1.82
H2afb2S4R1M3 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms