Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm42850-201ENSMUST00000202094 201 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm43897-201ENSMUST00000204019 309 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Mecom-201ENSMUST00000061088 348 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.7□□□□□ -1.82
H2afb1S4R1E0 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm14932-201ENSMUST00000117112 453 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm9440-201ENSMUST00000119667 539 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm15488-201ENSMUST00000121682 670 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm5123-201ENSMUST00000121905 837 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm5755-201ENSMUST00000152394 837 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm23906-201ENSMUST00000157573 128 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm22314-201ENSMUST00000158007 281 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Scarna6-201ENSMUST00000158656 265 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm8807-201ENSMUST00000179328 492 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Mir6903-201ENSMUST00000183597 88 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm27942-201ENSMUST00000184669 101 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm6051-201ENSMUST00000201529 352 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm44757-201ENSMUST00000206373 157 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 AC115047.1-201ENSMUST00000213795 322 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm4052-201ENSMUST00000220890 451 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
H2afb1S4R1E0 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Gm14898-201ENSMUST00000120202 645 ntBASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Gm12358-201ENSMUST00000121842 520 ntBASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Gm15116-201ENSMUST00000122248 663 ntBASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Gm23959-201ENSMUST00000157208 324 ntBASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Gm24198-201ENSMUST00000157812 108 ntBASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Gm26085-201ENSMUST00000157900 116 ntBASIC3.68□□□□□ -1.82
H2afb1S4R1E0 Gm23317-201ENSMUST00000157999 129 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms