Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm18529-201ENSMUST00000193025 1257 ntBASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Gm44343-201ENSMUST00000196702 90 ntBASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Gm43655-201ENSMUST00000197367 222 ntBASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Gm10145-201ENSMUST00000077776 462 ntBASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.37□□□□□ -1.87
Scn8aQ9WTU3 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm22361-201ENSMUST00000158435 176 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm27308-201ENSMUST00000184807 233 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm20561-201ENSMUST00000188131 292 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm28724-202ENSMUST00000194218 295 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm44600-201ENSMUST00000208540 111 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm14973-201ENSMUST00000117248 255 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm6893-201ENSMUST00000118385 522 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm11385-201ENSMUST00000121513 570 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm13508-201ENSMUST00000121639 775 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm12412-201ENSMUST00000121867 328 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm4540-201ENSMUST00000170669 429 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm19726-201ENSMUST00000205008 240 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Scn8aQ9WTU3 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm12739-201ENSMUST00000119769 382 ntBASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm26045-201ENSMUST00000157862 97 ntBASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Mrgprb13-201ENSMUST00000188191 985 ntBASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm28877-201ENSMUST00000191349 604 ntBASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm18719-201ENSMUST00000196696 1413 ntBASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.35□□□□□ -1.87
Scn8aQ9WTU3 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Gm28141-201ENSMUST00000186676 342 ntBASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Gm45860-201ENSMUST00000212700 334 ntBASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Gm18225-201ENSMUST00000216708 742 ntBASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Gm18363-201ENSMUST00000221671 730 ntBASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Gm9845-201ENSMUST00000056409 598 ntBASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Scn8aQ9WTU3 Gm14825-201ENSMUST00000113538 701 ntBASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Gm13761-201ENSMUST00000117238 807 ntBASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Gm14534-201ENSMUST00000120045 357 ntBASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Mir6413-201ENSMUST00000184049 108 ntBASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Gm5552-201ENSMUST00000197149 515 ntBASIC3.34□□□□□ -1.88
Scn8aQ9WTU3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms