Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm42526-201ENSMUST00000198956 393 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm8820-201ENSMUST00000204077 571 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm2059-201ENSMUST00000212025 287 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm23846-201ENSMUST00000083835 107 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim3Q9R1R2 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm24281-201ENSMUST00000104234 136 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm24318-201ENSMUST00000104490 131 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm14816-201ENSMUST00000117174 294 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm11446-201ENSMUST00000121319 866 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm7618-201ENSMUST00000121643 171 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm11344-201ENSMUST00000122011 335 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm24850-201ENSMUST00000158029 119 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm22398-201ENSMUST00000174941 125 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm25731-201ENSMUST00000175167 125 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm25999-201ENSMUST00000175398 133 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm21816-201ENSMUST00000179255 360 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Mir6393-201ENSMUST00000183709 94 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm28788-201ENSMUST00000189717 375 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm29558-201ENSMUST00000190134 375 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm18547-201ENSMUST00000192439 811 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm38356-201ENSMUST00000194313 408 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm44300-201ENSMUST00000196792 121 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm4501-201ENSMUST00000207330 551 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm4558-201ENSMUST00000207886 521 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm4528-201ENSMUST00000207905 551 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trim3Q9R1R2 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Mir804-201ENSMUST00000103251 95 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm13268-201ENSMUST00000117485 433 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm13314-201ENSMUST00000118742 335 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm26320-201ENSMUST00000157742 306 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm24739-201ENSMUST00000158855 292 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Mir6345-201ENSMUST00000184286 128 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm38061-201ENSMUST00000192490 365 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm5655-201ENSMUST00000221078 901 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trim3Q9R1R2 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim3Q9R1R2 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.66□□□□□ -1.82
Trim3Q9R1R2 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms