Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm18789-201ENSMUST00000216115 550 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 n-R5s173-201ENSMUST00000082620 119 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trem1Q9JKE2 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm22473-201ENSMUST00000104114 132 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm6584-201ENSMUST00000119671 447 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm12105-201ENSMUST00000120846 779 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm7350-201ENSMUST00000120964 636 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm6591-201ENSMUST00000121063 434 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm23789-201ENSMUST00000122536 301 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm15733-201ENSMUST00000132957 242 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Mir3110-201ENSMUST00000175053 80 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm13144-201ENSMUST00000179385 345 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Mir7008-201ENSMUST00000184398 63 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm28146-201ENSMUST00000185517 701 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm29454-201ENSMUST00000190805 393 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm43712-201ENSMUST00000198020 291 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm18327-201ENSMUST00000202426 830 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm44266-201ENSMUST00000205235 500 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trem1Q9JKE2 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm24951-201ENSMUST00000102182 109 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm15994-201ENSMUST00000118029 402 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm15905-201ENSMUST00000137042 298 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm8161-201ENSMUST00000168739 481 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm8604-201ENSMUST00000183150 965 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm37575-201ENSMUST00000195467 309 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm35702-201ENSMUST00000198653 511 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm7443-201ENSMUST00000206355 378 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm45458-201ENSMUST00000209900 522 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm17737-201ENSMUST00000210183 1147 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm46234-201ENSMUST00000218702 259 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm9628-201ENSMUST00000222169 725 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Gm23626-201ENSMUST00000082458 133 ntBASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trem1Q9JKE2 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm15231-201ENSMUST00000119174 447 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm11746-201ENSMUST00000119843 821 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm11830-201ENSMUST00000120175 561 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm13430-201ENSMUST00000121366 288 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm26487-201ENSMUST00000158022 94 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm16558-201ENSMUST00000163015 532 ntBASIC3.45□□□□□ -1.86
Trem1Q9JKE2 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Trem1Q9JKE2 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms