Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Gm42926-201ENSMUST00000200496 697 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Gm43090-201ENSMUST00000202459 314 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Lima1Q9ERG0 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm26418-201ENSMUST00000104275 137 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm11372-201ENSMUST00000117348 570 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm14810-201ENSMUST00000121628 486 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm25520-201ENSMUST00000158389 118 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm24666-201ENSMUST00000158937 167 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm3851-201ENSMUST00000168653 318 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm29408-201ENSMUST00000187536 216 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm36934-201ENSMUST00000192007 306 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm37603-201ENSMUST00000192368 219 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm44349-201ENSMUST00000197048 123 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm43494-201ENSMUST00000197672 388 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm44016-201ENSMUST00000203463 164 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm44475-201ENSMUST00000204041 424 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm18388-201ENSMUST00000222339 557 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Lima1Q9ERG0 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.47□□□□□ -1.85
Lima1Q9ERG0 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Lima1Q9ERG0 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Lima1Q9ERG0 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.46□□□□□ -1.85
Lima1Q9ERG0 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Lima1Q9ERG0 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm12401-201ENSMUST00000118435 228 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm11869-201ENSMUST00000118701 329 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm15387-201ENSMUST00000120421 648 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm24965-201ENSMUST00000157922 106 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm18604-201ENSMUST00000172535 558 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm20399-201ENSMUST00000174652 132 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm7094-201ENSMUST00000178379 366 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm20574-201ENSMUST00000182867 917 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm9775-201ENSMUST00000189402 331 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm37290-201ENSMUST00000195775 339 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm44919-201ENSMUST00000208587 1073 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Snord15a-201ENSMUST00000083888 148 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Gm5518-201ENSMUST00000084171 648 ntBASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Lima1Q9ERG0 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm6079-201ENSMUST00000121356 404 ntBASIC3.45□□□□□ -1.86
Lima1Q9ERG0 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm10357-201ENSMUST00000159886 264 ntBASIC3.45□□□□□ -1.86
Lima1Q9ERG0 Gm20542-201ENSMUST00000174582 372 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms