Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Upf1Q9EPU0 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm45262-201ENSMUST00000209917 1463 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm24124-201ENSMUST00000104103 132 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm9043-201ENSMUST00000119677 314 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm11325-201ENSMUST00000119967 469 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm22536-201ENSMUST00000158171 134 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm25434-201ENSMUST00000158278 167 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm22765-201ENSMUST00000158371 128 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm25817-201ENSMUST00000177758 121 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm24766-201ENSMUST00000179182 121 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm27883-201ENSMUST00000183941 102 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm29592-201ENSMUST00000189434 370 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm42924-201ENSMUST00000197261 185 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm44485-201ENSMUST00000199569 137 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm19921-201ENSMUST00000210505 703 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm32526-201ENSMUST00000221878 981 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm25260-201ENSMUST00000083053 134 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Mir132-201ENSMUST00000083603 66 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Upf1Q9EPU0 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm24273-201ENSMUST00000102332 164 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm13806-201ENSMUST00000117822 325 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm11219-201ENSMUST00000118565 358 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm23435-201ENSMUST00000157183 156 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm26988-201ENSMUST00000183296 945 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm27588-201ENSMUST00000185096 263 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm29634-201ENSMUST00000188467 696 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm28699-201ENSMUST00000189193 696 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm4036-201ENSMUST00000220842 626 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 AC124562.1-201ENSMUST00000224673 337 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Mir20a-201ENSMUST00000083508 107 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.72□□□□□ -1.49
Upf1Q9EPU0 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Upf1Q9EPU0 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms