Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Cdc40Q9DC48 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm26387-201ENSMUST00000104238 132 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm11843-201ENSMUST00000118984 425 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm3160-201ENSMUST00000128343 607 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm7855-201ENSMUST00000137737 687 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm22792-201ENSMUST00000157225 133 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm23591-201ENSMUST00000157663 286 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm23084-201ENSMUST00000157850 114 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm24553-201ENSMUST00000158653 131 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm6625-201ENSMUST00000177870 272 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm27025-201ENSMUST00000182392 942 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Mir6385-201ENSMUST00000184295 105 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm37164-201ENSMUST00000192809 637 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm29704-201ENSMUST00000196011 253 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm18429-201ENSMUST00000198707 421 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm7380-201ENSMUST00000211599 466 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm18120-201ENSMUST00000220079 511 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.51□□□□□ -1.85
Cdc40Q9DC48 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm25764-201ENSMUST00000104092 134 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm7421-201ENSMUST00000119298 639 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm6071-201ENSMUST00000119561 440 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm7365-201ENSMUST00000120877 639 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm14845-201ENSMUST00000121259 306 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Mir6408-201ENSMUST00000183643 91 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm37617-201ENSMUST00000194309 159 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm44703-201ENSMUST00000205724 248 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm6929-201ENSMUST00000210930 468 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm5358-201ENSMUST00000212814 353 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm22868-201ENSMUST00000083955 164 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Olfr1160-201ENSMUST00000099839 960 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.5□□□□□ -1.85
Cdc40Q9DC48 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
Cdc40Q9DC48 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms