Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm6982-201ENSMUST00000118752 1560 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm37965-201ENSMUST00000195304 1362 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Mir592-201ENSMUST00000102113 96 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm24788-201ENSMUST00000104283 156 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm22493-201ENSMUST00000104494 132 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Snora64-201ENSMUST00000104521 134 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm16017-201ENSMUST00000119834 208 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm23777-201ENSMUST00000158994 259 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm19807-201ENSMUST00000173971 667 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm25026-201ENSMUST00000175017 188 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm27899-201ENSMUST00000184715 64 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm8498-201ENSMUST00000188227 974 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm5368-201ENSMUST00000189012 589 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm8403-201ENSMUST00000189712 1298 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm28655-201ENSMUST00000191538 692 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm37578-201ENSMUST00000192256 1177 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm37709-201ENSMUST00000195074 600 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm43491-201ENSMUST00000197133 784 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm17780-201ENSMUST00000207142 612 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm5338-201ENSMUST00000209530 639 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm23510-201ENSMUST00000083083 163 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Mir27a-201ENSMUST00000083510 87 ntBASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Vps28Q9D1C8 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm7739-201ENSMUST00000221131 1560 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm23481-201ENSMUST00000104173 131 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm14352-201ENSMUST00000119250 449 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm15116-201ENSMUST00000122248 663 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm24537-201ENSMUST00000157950 102 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm27952-201ENSMUST00000184748 105 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28304-201ENSMUST00000185977 312 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28471-201ENSMUST00000185994 615 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28598-201ENSMUST00000186490 615 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm29268-201ENSMUST00000188669 615 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm29256-201ENSMUST00000189094 312 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28484-201ENSMUST00000190606 312 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm29218-205ENSMUST00000190846 615 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28978-201ENSMUST00000191120 615 ntBASIC4.32□□□□□ -1.72
Vps28Q9D1C8 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms